Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
RHOP08100 RPS29P1-201ENST00000465274 159 ntBASIC1.18□□□□□ -2.22
RHOP08100 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
RHOP08100 Y_RNA.677-201ENST00000516401 85 ntBASIC1.18□□□□□ -2.22
RHOP08100 U6.109-201ENST00000636749 87 ntBASIC1.18□□□□□ -2.22
RHOP08100 RNU6-369P-201ENST00000362515 102 ntBASIC1.17□□□□□ -2.22
RHOP08100 Y_RNA.107-201ENST00000363190 121 ntBASIC1.17□□□□□ -2.22
RHOP08100 RNA5SP133-201ENST00000363368 119 ntBASIC1.17□□□□□ -2.22
RHOP08100 RNU6-640P-201ENST00000363693 105 ntBASIC1.17□□□□□ -2.22
RHOP08100 MIR7-2-201ENST00000384970 110 ntBASIC1.17□□□□□ -2.22
RHOP08100 MIR222-201ENST00000384992 110 ntBASIC1.17□□□□□ -2.22
RHOP08100 SNORD93-201ENST00000408813 74 ntBASIC1.17□□□□□ -2.22
RHOP08100 RPS26P5-201ENST00000418544 335 ntBASIC1.17□□□□□ -2.22
RHOP08100 AC004941.2-201ENST00000427009 228 ntBASIC1.17□□□□□ -2.22
RHOP08100 RNU6-1194P-201ENST00000516208 104 ntBASIC1.17□□□□□ -2.22
RHOP08100 RNU6-109P-201ENST00000516364 107 ntBASIC1.17□□□□□ -2.22
RHOP08100 RNU6-184P-201ENST00000516514 107 ntBASIC1.17□□□□□ -2.22
RHOP08100 MIR4491-201ENST00000581087 68 ntBASIC1.17□□□□□ -2.22
RHOP08100 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
RHOP08100 RNU6-170P-201ENST00000362832 104 ntBASIC1.16□□□□□ -2.22
RHOP08100 Y_RNA.95-201ENST00000363079 95 ntBASIC1.16□□□□□ -2.22
RHOP08100 RNU6-905P-201ENST00000384434 107 ntBASIC1.16□□□□□ -2.22
RHOP08100 SNORA40.13-201ENST00000516379 120 ntBASIC1.16□□□□□ -2.22
RHOP08100 MIR4771-2-201ENST00000577758 74 ntBASIC1.16□□□□□ -2.22
RHOP08100 MIR4771-1-201ENST00000582617 74 ntBASIC1.16□□□□□ -2.22
RHOP08100 MIR2052-201ENST00000636055 55 ntBASIC1.16□□□□□ -2.22
RHOP08100 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RHOP08100 MIR125B2-201ENST00000385128 89 ntBASIC1.15□□□□□ -2.23
RHOP08100 MIR548G-201ENST00000408442 89 ntBASIC1.15□□□□□ -2.23
RHOP08100 RNU6-994P-201ENST00000410507 111 ntBASIC1.15□□□□□ -2.23
RHOP08100 MTATP8P2-201ENST00000435212 202 ntBASIC1.15□□□□□ -2.23
RHOP08100 SNRPGP12-201ENST00000449481 213 ntBASIC1.15□□□□□ -2.23
RHOP08100 Y_RNA.659-201ENST00000515994 113 ntBASIC1.15□□□□□ -2.23
RHOP08100 Y_RNA.694-201ENST00000516677 117 ntBASIC1.15□□□□□ -2.23
RHOP08100 RNU6-765P-201ENST00000516916 99 ntBASIC1.15□□□□□ -2.23
RHOP08100 AC020891.4-201ENST00000605745 93 ntBASIC1.15□□□□□ -2.23
RHOP08100 AC091304.10-201ENST00000641554 121 ntBASIC1.15□□□□□ -2.23
RHOP08100 Y_RNA.96-201ENST00000363092 109 ntBASIC1.14□□□□□ -2.23
RHOP08100 Y_RNA.119-201ENST00000363301 96 ntBASIC1.14□□□□□ -2.23
RHOP08100 RNU4-83P-201ENST00000410863 133 ntBASIC1.14□□□□□ -2.23
RHOP08100 AC090897.1-201ENST00000580909 226 ntBASIC1.14□□□□□ -2.23
RHOP08100 MIR4676-201ENST00000583078 72 ntBASIC1.14□□□□□ -2.23
RHOP08100 MIR4777-201ENST00000583710 86 ntBASIC1.14□□□□□ -2.23
RHOP08100 AC022709.1-201ENST00000615967 87 ntBASIC1.14□□□□□ -2.23
RHOP08100 AC012531.4-201ENST00000616509 177 ntBASIC1.14□□□□□ -2.23
RHOP08100 MIR8066-201ENST00000617280 78 ntBASIC1.14□□□□□ -2.23
RHOP08100 MIR6515-201ENST00000619843 57 ntBASIC1.14□□□□□ -2.23
RHOP08100 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RHOP08100 RNU6-1298P-201ENST00000362456 101 ntBASIC1.13□□□□□ -2.23
RHOP08100 Y_RNA.42-201ENST00000362660 108 ntBASIC1.13□□□□□ -2.23
RHOP08100 RNU4-58P-201ENST00000363192 141 ntBASIC1.13□□□□□ -2.23
RHOP08100 Y_RNA.173-201ENST00000363776 113 ntBASIC1.13□□□□□ -2.23
RHOP08100 MIR1827-201ENST00000408549 66 ntBASIC1.13□□□□□ -2.23
RHOP08100 AC015818.7-201ENST00000428754 109 ntBASIC1.13□□□□□ -2.23
RHOP08100 AC087499.7-201ENST00000441958 109 ntBASIC1.13□□□□□ -2.23
RHOP08100 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.13□□□□□ -2.23
RHOP08100 RNA5SP480-201ENST00000516840 109 ntBASIC1.13□□□□□ -2.23
RHOP08100 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.13□□□□□ -2.23
RHOP08100 SNORD92-201ENST00000585078 85 ntBASIC1.13□□□□□ -2.23
RHOP08100 RNU6-90P-201ENST00000606352 106 ntBASIC1.13□□□□□ -2.23
RHOP08100 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.13□□□□□ -2.23
RHOP08100 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
RHOP08100 RNU6-1163P-201ENST00000364516 107 ntBASIC1.12□□□□□ -2.23
RHOP08100 RNU6-571P-201ENST00000384128 107 ntBASIC1.12□□□□□ -2.23
RHOP08100 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
RHOP08100 RNU6-795P-201ENST00000516323 103 ntBASIC1.12□□□□□ -2.23
RHOP08100 SNORA25.16-201ENST00000516741 121 ntBASIC1.12□□□□□ -2.23
RHOP08100 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
RHOP08100 RNU6-1223P-201ENST00000517124 104 ntBASIC1.12□□□□□ -2.23
RHOP08100 MIR151B-201ENST00000584249 96 ntBASIC1.12□□□□□ -2.23
RHOP08100 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
RHOP08100 MIR6788-201ENST00000618842 66 ntBASIC1.12□□□□□ -2.23
RHOP08100 RNU6-1244P-201ENST00000363614 108 ntBASIC1.11□□□□□ -2.23
RHOP08100 Y_RNA.540-201ENST00000384638 111 ntBASIC1.11□□□□□ -2.23
RHOP08100 MIR200A-201ENST00000384875 90 ntBASIC1.11□□□□□ -2.23
RHOP08100 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.11□□□□□ -2.23
RHOP08100 MIR4804-201ENST00000581683 73 ntBASIC1.11□□□□□ -2.23
RHOP08100 MIR1-1-201ENST00000362147 71 ntBASIC1.1□□□□□ -2.23
RHOP08100 Y_RNA.13-201ENST00000362403 112 ntBASIC1.1□□□□□ -2.23
RHOP08100 RNU6-403P-201ENST00000363163 104 ntBASIC1.1□□□□□ -2.23
RHOP08100 SNORA72.6-201ENST00000384520 129 ntBASIC1.1□□□□□ -2.23
RHOP08100 MIR938-201ENST00000401216 83 ntBASIC1.1□□□□□ -2.23
RHOP08100 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.1□□□□□ -2.23
RHOP08100 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
RHOP08100 SPINT5P-201ENST00000448174 155 ntBASIC1.1□□□□□ -2.23
RHOP08100 AC109327.2-201ENST00000448339 378 ntBASIC1.1□□□□□ -2.23
RHOP08100 RNU6-531P-201ENST00000516694 104 ntBASIC1.1□□□□□ -2.23
RHOP08100 MIR4500-201ENST00000579472 76 ntBASIC1.1□□□□□ -2.23
RHOP08100 MIR548Z-201ENST00000584743 97 ntBASIC1.1□□□□□ -2.23
RHOP08100 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
RHOP08100 RNU6-813P-201ENST00000384691 107 ntBASIC1.09□□□□□ -2.23
RHOP08100 Y_RNA.567-201ENST00000384736 106 ntBASIC1.09□□□□□ -2.23
RHOP08100 MIR100-201ENST00000385259 80 ntBASIC1.09□□□□□ -2.23
RHOP08100 FABP5P4-201ENST00000437203 171 ntBASIC1.09□□□□□ -2.23
RHOP08100 RNU6-1110P-201ENST00000516462 101 ntBASIC1.09□□□□□ -2.23
RHOP08100 Y_RNA.705-201ENST00000516862 110 ntBASIC1.09□□□□□ -2.23
RHOP08100 RNU7-156P-201ENST00000517214 74 ntBASIC1.09□□□□□ -2.23
RHOP08100 AP003327.1-201ENST00000529684 127 ntBASIC1.09□□□□□ -2.23
RHOP08100 MTND5P40-201ENST00000559945 246 ntBASIC1.09□□□□□ -2.23
RHOP08100 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 1081.4 ms