Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
SPDEFO95238 SNORA67.5-201ENST00000391036 107 ntBASIC1.23□□□□□ -2.21
SPDEFO95238 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SPDEFO95238 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SPDEFO95238 Y_RNA.42-201ENST00000362660 108 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 RNY1P1-201ENST00000364372 112 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 SNORA67.6-201ENST00000391093 99 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 MIR1289-2-201ENST00000408360 111 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 MIR1261-201ENST00000408659 82 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 Y_RNA.609-201ENST00000410669 89 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 Y_RNA.620-201ENST00000411009 88 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 RNU6-765P-201ENST00000516916 99 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 RNU6-548P-201ENST00000517083 115 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 SNORA31.24-201ENST00000517232 57 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 MIR4676-201ENST00000583078 72 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 AC013244.2-201ENST00000603396 103 ntBASIC1.22□□□□□ -2.21
SPDEFO95238 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
SPDEFO95238 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
SPDEFO95238 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 RNU6-1152P-201ENST00000384576 107 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 RNY1P4-201ENST00000384595 115 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 RNU6-267P-201ENST00000516714 103 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 IGLL4P-201ENST00000614590 133 ntBASIC1.21□□□□□ -2.22
SPDEFO95238 MIR101-2-201ENST00000362195 79 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 SNORD100-201ENST00000408573 76 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 AL161932.1-201ENST00000437408 146 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 RNU7-156P-201ENST00000517214 74 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 SNORD92-201ENST00000585078 85 ntBASIC1.2□□□□□ -2.22
SPDEFO95238 RNA5SP173-201ENST00000364857 136 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPDEFO95238 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 MIR516A2-201ENST00000384888 90 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 MIR516A1-201ENST00000385033 90 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 MIR4781-201ENST00000585250 76 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
SPDEFO95238 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 SNORD36A-201ENST00000362874 73 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 Y_RNA.73-201ENST00000362910 113 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 RNU6-497P-201ENST00000365316 104 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 MIR938-201ENST00000401216 83 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 SNORD63B-201ENST00000411005 70 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 RNU6-592P-201ENST00000411333 103 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 SNORD13-201ENST00000459299 104 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 Y_RNA.648-201ENST00000459455 110 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 AC022137.1-201ENST00000483735 151 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 MIR548H5-201ENST00000580314 60 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 AL645939.4-201ENST00000604495 135 ntBASIC1.18□□□□□ -2.22
SPDEFO95238 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SPDEFO95238 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SPDEFO95238 RNU6-633P-201ENST00000362612 103 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 Y_RNA.56-201ENST00000362798 112 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 RNU6-364P-201ENST00000384387 107 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 Y_RNA.536-201ENST00000384621 113 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 MIR635-201ENST00000384830 98 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SPDEFO95238 RNU6-1254P-201ENST00000391266 104 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
SPDEFO95238 MIR1323-201ENST00000408090 73 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 RNU6-519P-201ENST00000410590 108 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 RNU7-106P-201ENST00000459514 67 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 MIR4804-201ENST00000581683 73 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 RNU7-10P-201ENST00000607194 63 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.17□□□□□ -2.22
SPDEFO95238 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
SPDEFO95238 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SPDEFO95238 MIR519A1-201ENST00000385257 85 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 MIR100-201ENST00000385259 80 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 MIR1827-201ENST00000408549 66 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 AL354695.1-201ENST00000427935 228 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 RNU7-102P-201ENST00000458948 62 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 TRAJ51-201ENST00000504127 63 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 RNU6-977P-201ENST00000516411 103 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 Y_RNA.697-201ENST00000516776 113 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 MIR5588-201ENST00000581890 63 ntBASIC1.16□□□□□ -2.22
SPDEFO95238 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SPDEFO95238 MIR1-1-201ENST00000362147 71 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 RNU6-509P-201ENST00000363519 107 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 RNU6-573P-201ENST00000383938 106 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 RNU6-243P-201ENST00000391140 107 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 AC092628.1-201ENST00000436250 252 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 AC067940.1-201ENST00000458411 300 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 RNU7-85P-201ENST00000458851 63 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 AP003327.1-201ENST00000529684 127 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 MIR7843-201ENST00000622274 79 ntBASIC1.15□□□□□ -2.23
SPDEFO95238 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SPDEFO95238 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 RNU6-979P-201ENST00000383896 107 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 RNU7-56P-201ENST00000458744 62 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 SNORD4B-201ENST00000459083 72 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 snoU13.11-201ENST00000459219 104 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 RNU6-448P-201ENST00000517052 107 ntBASIC1.14□□□□□ -2.23
SPDEFO95238 Y_RNA.4-201ENST00000362333 112 ntBASIC1.13□□□□□ -2.23
SPDEFO95238 SNORD115-27-201ENST00000364430 82 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms