Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR588-201ENST00000384900 83 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 MIR516A1-201ENST00000385033 90 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 RNU6-321P-201ENST00000410912 106 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 AC125388.1-201ENST00000459631 156 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 RNU6-70P-201ENST00000516438 60 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.26□□□□□ -2.05
PTCD1O75127 uc_338.6-201ENST00000613544 171 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PTCD1O75127 RNU6-205P-201ENST00000390858 107 ntBASIC2.25□□□□□ -2.05
PTCD1O75127 snoU13.25-201ENST00000458945 104 ntBASIC2.25□□□□□ -2.05
PTCD1O75127 RNU6-634P-201ENST00000459134 106 ntBASIC2.25□□□□□ -2.05
PTCD1O75127 FGF7P7-201ENST00000514120 227 ntBASIC2.25□□□□□ -2.05
PTCD1O75127 MIR6740-201ENST00000618268 113 ntBASIC2.25□□□□□ -2.05
PTCD1O75127 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
PTCD1O75127 MIRLET7F1-201ENST00000362202 87 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 MIR302D-201ENST00000362275 68 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 Y_RNA.119-201ENST00000363301 96 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 RNU6-1065P-201ENST00000384513 106 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 SNORA72.6-201ENST00000384520 129 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 RNU6-540P-201ENST00000384622 101 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 snoU13.2-201ENST00000459201 104 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 AL133373.1-201ENST00000497098 94 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 MIR2115-201ENST00000516657 100 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 AC104996.3-201ENST00000590718 94 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 MIR502-201ENST00000606349 86 ntBASIC2.24□□□□□ -2.05
PTCD1O75127 MIR103A2-201ENST00000362154 78 ntBASIC2.23□□□□□ -2.05
PTCD1O75127 Y_RNA.283-201ENST00000364798 112 ntBASIC2.23□□□□□ -2.05
PTCD1O75127 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
PTCD1O75127 MIR1287-201ENST00000408492 90 ntBASIC2.23□□□□□ -2.05
PTCD1O75127 AL356379.1-201ENST00000414105 126 ntBASIC2.23□□□□□ -2.05
PTCD1O75127 RNU7-106P-201ENST00000459514 67 ntBASIC2.23□□□□□ -2.05
PTCD1O75127 RN7SL274P-201ENST00000492268 272 ntBASIC2.23□□□□□ -2.05
PTCD1O75127 SNORD33-201ENST00000362761 85 ntBASIC2.22□□□□□ -2.05
PTCD1O75127 RNA5SP37-201ENST00000365420 130 ntBASIC2.22□□□□□ -2.05
PTCD1O75127 RNU6-571P-201ENST00000384128 107 ntBASIC2.22□□□□□ -2.05
PTCD1O75127 MIR563-201ENST00000385080 79 ntBASIC2.22□□□□□ -2.05
PTCD1O75127 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
PTCD1O75127 MIR4264-201ENST00000583520 66 ntBASIC2.22□□□□□ -2.05
PTCD1O75127 MIR4536-1-201ENST00000583537 88 ntBASIC2.22□□□□□ -2.05
PTCD1O75127 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
PTCD1O75127 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PTCD1O75127 MIR30D-201ENST00000362283 70 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 RNU6-330P-201ENST00000363015 107 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 SNORD115-31-201ENST00000365318 82 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 SNORA67.5-201ENST00000391036 107 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 SNORD77.2-201ENST00000391045 68 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 AC074348.1-201ENST00000426503 132 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 snoU13.17-201ENST00000458802 104 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 RNU6-871P-201ENST00000516122 100 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 MIR4419B-201ENST00000577260 68 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 MIR4255-201ENST00000579351 72 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 AL359821.1-201ENST00000605519 182 ntBASIC2.21□□□□□ -2.06
PTCD1O75127 RNA5SP264-201ENST00000363115 107 ntBASIC2.2□□□□□ -2.06
PTCD1O75127 Y_RNA.491-201ENST00000384417 107 ntBASIC2.2□□□□□ -2.06
PTCD1O75127 RPL30P7-201ENST00000479312 323 ntBASIC2.2□□□□□ -2.06
PTCD1O75127 TRMT112P2-201ENST00000512910 132 ntBASIC2.2□□□□□ -2.06
PTCD1O75127 Y_RNA.660-201ENST00000516002 120 ntBASIC2.2□□□□□ -2.06
PTCD1O75127 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PTCD1O75127 RNU6-957P-201ENST00000363652 99 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 Y_RNA.205-201ENST00000364128 113 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 RNU6-587P-201ENST00000391282 106 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 MIR1185-1-201ENST00000408598 86 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 RNU7-62P-201ENST00000458856 62 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 MIR2113-201ENST00000459007 91 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 RNU7-95P-201ENST00000459222 64 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 MIR6516-201ENST00000630554 81 ntBASIC2.19□□□□□ -2.06
PTCD1O75127 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PTCD1O75127 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PTCD1O75127 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PTCD1O75127 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PTCD1O75127 RNU6-208P-201ENST00000362431 107 ntBASIC2.18□□□□□ -2.06
PTCD1O75127 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PTCD1O75127 Y_RNA.596-201ENST00000410462 109 ntBASIC2.18□□□□□ -2.06
PTCD1O75127 Y_RNA.681-201ENST00000516445 113 ntBASIC2.18□□□□□ -2.06
PTCD1O75127 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.18□□□□□ -2.06
PTCD1O75127 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
PTCD1O75127 RNU6-654P-201ENST00000364373 107 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 RNU6-649P-201ENST00000384463 107 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 RNU6-1165P-201ENST00000410119 107 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 RNU6-380P-201ENST00000410207 107 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 RNA5SP95-201ENST00000410319 137 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 AL606490.4-201ENST00000423117 127 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.17□□□□□ -2.06
PTCD1O75127 MIR3198-2-201ENST00000577868 80 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 MIR3664-201ENST00000579074 99 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 SNORA4-201ENST00000584302 138 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 AL645939.4-201ENST00000604495 135 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 MIR8070-201ENST00000616510 88 ntBASIC2.17□□□□□ -2.06
PTCD1O75127 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PTCD1O75127 MIR337-201ENST00000362281 93 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 SNORA25.9-201ENST00000365087 128 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 RNU6-800P-201ENST00000384473 103 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 RNU6-1241P-201ENST00000384536 107 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 MT-TN-201ENST00000387400 73 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 RNU6-1254P-201ENST00000391266 104 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 236.1 ms