Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 IGLL4P-201ENST00000614590 133 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 Y_RNA.620-201ENST00000411009 88 ntBASIC1.47□□□□□ -2.17
NPHS1O60500 RNU6-592P-201ENST00000411333 103 ntBASIC1.47□□□□□ -2.17
NPHS1O60500 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.47□□□□□ -2.17
NPHS1O60500 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
NPHS1O60500 MIR4676-201ENST00000583078 72 ntBASIC1.47□□□□□ -2.17
NPHS1O60500 RNA5SP327-201ENST00000362494 101 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 RNU6-369P-201ENST00000362515 102 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 Y_RNA.73-201ENST00000362910 113 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 MIR516A2-201ENST00000384888 90 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 MIR516A1-201ENST00000385033 90 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 SNORD100-201ENST00000408573 76 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 RNU6-994P-201ENST00000410507 111 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 AL591806.2-201ENST00000433122 173 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 RNU7-156P-201ENST00000517214 74 ntBASIC1.46□□□□□ -2.18
NPHS1O60500 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NPHS1O60500 Y_RNA.42-201ENST00000362660 108 ntBASIC1.45□□□□□ -2.18
NPHS1O60500 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
NPHS1O60500 RNU6-573P-201ENST00000383938 106 ntBASIC1.45□□□□□ -2.18
NPHS1O60500 MIR517C-201ENST00000385103 95 ntBASIC1.45□□□□□ -2.18
NPHS1O60500 AC022137.1-201ENST00000483735 151 ntBASIC1.45□□□□□ -2.18
NPHS1O60500 RNU6-1194P-201ENST00000516208 104 ntBASIC1.45□□□□□ -2.18
NPHS1O60500 MIR4781-201ENST00000585250 76 ntBASIC1.45□□□□□ -2.18
NPHS1O60500 MIR101-2-201ENST00000362195 79 ntBASIC1.44□□□□□ -2.18
NPHS1O60500 Y_RNA.191-201ENST00000363972 113 ntBASIC1.44□□□□□ -2.18
NPHS1O60500 RNU6-1152P-201ENST00000384576 107 ntBASIC1.44□□□□□ -2.18
NPHS1O60500 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
NPHS1O60500 RNU7-106P-201ENST00000459514 67 ntBASIC1.44□□□□□ -2.18
NPHS1O60500 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
NPHS1O60500 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NPHS1O60500 SNORD12-201ENST00000391002 90 ntBASIC1.43□□□□□ -2.18
NPHS1O60500 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
NPHS1O60500 AC002429.1-201ENST00000437672 148 ntBASIC1.43□□□□□ -2.18
NPHS1O60500 RPS29P23-201ENST00000458635 123 ntBASIC1.43□□□□□ -2.18
NPHS1O60500 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.43□□□□□ -2.18
NPHS1O60500 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NPHS1O60500 SNORD36A-201ENST00000362874 73 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 RNU6-364P-201ENST00000384387 107 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 MIR938-201ENST00000401216 83 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 SNORD63B-201ENST00000411005 70 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 TRAJ51-201ENST00000504127 63 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.42□□□□□ -2.18
NPHS1O60500 MIR4804-201ENST00000581683 73 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
NPHS1O60500 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
NPHS1O60500 Y_RNA.536-201ENST00000384621 113 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 MIR100-201ENST00000385259 80 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 RNU6-519P-201ENST00000410590 108 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 AL161932.1-201ENST00000437408 146 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 snoU13.23-201ENST00000458863 104 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 RNU6-765P-201ENST00000516916 99 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 SNORD92-201ENST00000585078 85 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 AL353997.5-201ENST00000618886 171 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 AC027335.2-201ENST00000624030 375 ntBASIC1.41□□□□□ -2.18
NPHS1O60500 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NPHS1O60500 SNORD115-27-201ENST00000364430 82 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 RNU6-497P-201ENST00000365316 104 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 MIR635-201ENST00000384830 98 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 RNU6-1254P-201ENST00000391266 104 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
NPHS1O60500 RNU7-102P-201ENST00000458948 62 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 Y_RNA.648-201ENST00000459455 110 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 RNU6-977P-201ENST00000516411 103 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 Y_RNA.697-201ENST00000516776 113 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 AC015712.3-201ENST00000559380 164 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 AC008608.1-201ENST00000603910 127 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 AL512598.1-201ENST00000610158 273 ntBASIC1.4□□□□□ -2.19
NPHS1O60500 MIR1-1-201ENST00000362147 71 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 RNU6-633P-201ENST00000362612 103 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 RNU6-509P-201ENST00000363519 107 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 RNA5SP190-201ENST00000365222 118 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 RNU6-243P-201ENST00000391140 107 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 RNU7-85P-201ENST00000458851 63 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 snoU13.11-201ENST00000459219 104 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 MIR548H5-201ENST00000580314 60 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 MIR5588-201ENST00000581890 63 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 MIR4769-201ENST00000584126 77 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.39□□□□□ -2.19
NPHS1O60500 MIR1245B-201ENST00000636115 69 ntBASIC1.39□□□□□ -2.19
NPHS1O60500 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 Y_RNA.4-201ENST00000362333 112 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 Y_RNA.56-201ENST00000362798 112 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 RNA5SP99-201ENST00000364020 114 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
NPHS1O60500 SNORA67.5-201ENST00000391036 107 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 SNORA67.6-201ENST00000391093 99 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 Y_RNA.611-201ENST00000410682 108 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 AC092628.1-201ENST00000436250 252 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 RNU7-56P-201ENST00000458744 62 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 RNU7-195P-201ENST00000458793 62 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms