Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU4-83P-201ENST00000410863 133 ntBASIC0.79□□□□□ -2.28
PRKNO60260 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.79□□□□□ -2.28
PRKNO60260 RNU7-156P-201ENST00000517214 74 ntBASIC0.79□□□□□ -2.28
PRKNO60260 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.79□□□□□ -2.28
PRKNO60260 Y_RNA.163-201ENST00000363702 113 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-1187P-201ENST00000364771 110 ntBASIC0.78□□□□□ -2.28
PRKNO60260 Y_RNA.360-201ENST00000365512 102 ntBASIC0.78□□□□□ -2.28
PRKNO60260 MIR605-201ENST00000385078 83 ntBASIC0.78□□□□□ -2.28
PRKNO60260 MIR520H-201ENST00000385126 88 ntBASIC0.78□□□□□ -2.28
PRKNO60260 SNORD105-201ENST00000386910 85 ntBASIC0.78□□□□□ -2.28
PRKNO60260 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-447P-201ENST00000410293 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-1118P-201ENST00000410382 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-1076P-201ENST00000410397 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-355P-201ENST00000410427 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-791P-201ENST00000410467 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-705P-201ENST00000410601 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-1100P-201ENST00000410691 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-860P-201ENST00000410860 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-1217P-201ENST00000411276 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-785P-201ENST00000411324 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU7-48P-201ENST00000458875 63 ntBASIC0.78□□□□□ -2.28
PRKNO60260 AC133485.1-201ENST00000567176 124 ntBASIC0.78□□□□□ -2.28
PRKNO60260 MIR4491-201ENST00000581087 68 ntBASIC0.78□□□□□ -2.28
PRKNO60260 U6.90-201ENST00000614007 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 U6.70-201ENST00000620287 104 ntBASIC0.78□□□□□ -2.28
PRKNO60260 RNU6-1313P-201ENST00000362622 102 ntBASIC0.77□□□□□ -2.29
PRKNO60260 RNA5SP325-201ENST00000363756 130 ntBASIC0.77□□□□□ -2.29
PRKNO60260 RNU6-865P-201ENST00000364772 107 ntBASIC0.77□□□□□ -2.29
PRKNO60260 SNORA72.6-201ENST00000384520 129 ntBASIC0.77□□□□□ -2.29
PRKNO60260 MIR34C-201ENST00000384831 77 ntBASIC0.77□□□□□ -2.29
PRKNO60260 Y_RNA.588-201ENST00000391254 102 ntBASIC0.77□□□□□ -2.29
PRKNO60260 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.77□□□□□ -2.29
PRKNO60260 RNU7-56P-201ENST00000458744 62 ntBASIC0.77□□□□□ -2.29
PRKNO60260 RNU7-102P-201ENST00000458948 62 ntBASIC0.77□□□□□ -2.29
PRKNO60260 RNU6-1018P-201ENST00000516577 106 ntBASIC0.77□□□□□ -2.29
PRKNO60260 AC138749.4-201ENST00000563970 127 ntBASIC0.77□□□□□ -2.29
PRKNO60260 MIR4694-201ENST00000578534 80 ntBASIC0.77□□□□□ -2.29
PRKNO60260 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.77□□□□□ -2.29
PRKNO60260 MIR376B-201ENST00000614515 100 ntBASIC0.77□□□□□ -2.29
PRKNO60260 U6.109-201ENST00000636749 87 ntBASIC0.77□□□□□ -2.29
PRKNO60260 Y_RNA.328-201ENST00000365208 113 ntBASIC0.76□□□□□ -2.29
PRKNO60260 RNU6-1201P-201ENST00000384227 107 ntBASIC0.76□□□□□ -2.29
PRKNO60260 MIR577-201ENST00000385196 96 ntBASIC0.76□□□□□ -2.29
PRKNO60260 RNU1-119P-201ENST00000391122 165 ntBASIC0.76□□□□□ -2.29
PRKNO60260 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
PRKNO60260 RNA5SP436-201ENST00000516020 115 ntBASIC0.76□□□□□ -2.29
PRKNO60260 SNORA25.16-201ENST00000516741 121 ntBASIC0.76□□□□□ -2.29
PRKNO60260 AC025627.3-201ENST00000582078 182 ntBASIC0.76□□□□□ -2.29
PRKNO60260 AC008608.1-201ENST00000603910 127 ntBASIC0.76□□□□□ -2.29
PRKNO60260 AP001362.1-201ENST00000625165 124 ntBASIC0.76□□□□□ -2.29
PRKNO60260 Y_RNA.13-201ENST00000362403 112 ntBASIC0.75□□□□□ -2.29
PRKNO60260 RNY3P2-201ENST00000362918 102 ntBASIC0.75□□□□□ -2.29
PRKNO60260 RNA5SP133-201ENST00000363368 119 ntBASIC0.75□□□□□ -2.29
PRKNO60260 RNU6-153P-201ENST00000364422 104 ntBASIC0.75□□□□□ -2.29
PRKNO60260 RNY1P2-201ENST00000364820 117 ntBASIC0.75□□□□□ -2.29
PRKNO60260 MIR1302-5-201ENST00000408164 150 ntBASIC0.75□□□□□ -2.29
PRKNO60260 SNORD99-201ENST00000408612 74 ntBASIC0.75□□□□□ -2.29
PRKNO60260 SNORA19.1-201ENST00000410656 129 ntBASIC0.75□□□□□ -2.29
PRKNO60260 AL031737.1-201ENST00000450125 223 ntBASIC0.75□□□□□ -2.29
PRKNO60260 RNU6-1006P-201ENST00000516998 103 ntBASIC0.75□□□□□ -2.29
PRKNO60260 DEFB131E-201ENST00000532329 154 ntBASIC0.75□□□□□ -2.29
PRKNO60260 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
PRKNO60260 SNORD92-201ENST00000585078 85 ntBASIC0.75□□□□□ -2.29
PRKNO60260 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.75□□□□□ -2.29
PRKNO60260 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
PRKNO60260 MIR450A1-201ENST00000362262 91 ntBASIC0.74□□□□□ -2.29
PRKNO60260 Y_RNA.98-201ENST00000363109 102 ntBASIC0.74□□□□□ -2.29
PRKNO60260 Y_RNA.377-201ENST00000365644 108 ntBASIC0.74□□□□□ -2.29
PRKNO60260 RNU6-147P-201ENST00000383983 107 ntBASIC0.74□□□□□ -2.29
PRKNO60260 AC141557.1-201ENST00000540982 400 ntBASIC0.74□□□□□ -2.29
PRKNO60260 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
PRKNO60260 AL442128.1-201ENST00000615151 90 ntBASIC0.74□□□□□ -2.29
PRKNO60260 MIR8066-201ENST00000617280 78 ntBASIC0.74□□□□□ -2.29
PRKNO60260 AL512310.12-203ENST00000640543 90 ntBASIC0.74□□□□□ -2.29
PRKNO60260 RNU6-766P-201ENST00000362478 107 ntBASIC0.73□□□□□ -2.29
PRKNO60260 Y_RNA.42-201ENST00000362660 108 ntBASIC0.73□□□□□ -2.29
PRKNO60260 Y_RNA.78-201ENST00000362970 110 ntBASIC0.73□□□□□ -2.29
PRKNO60260 RNU6-832P-201ENST00000363319 107 ntBASIC0.73□□□□□ -2.29
PRKNO60260 RNU6-1099P-201ENST00000363533 107 ntBASIC0.73□□□□□ -2.29
PRKNO60260 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
PRKNO60260 Y_RNA.247-201ENST00000364500 92 ntBASIC0.73□□□□□ -2.29
PRKNO60260 RNU6-756P-201ENST00000383997 107 ntBASIC0.73□□□□□ -2.29
PRKNO60260 SNORA51.5-201ENST00000384126 131 ntBASIC0.73□□□□□ -2.29
PRKNO60260 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
PRKNO60260 RNU6-904P-201ENST00000516206 101 ntBASIC0.73□□□□□ -2.29
PRKNO60260 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
PRKNO60260 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
PRKNO60260 AC011195.1-201ENST00000578177 177 ntBASIC0.73□□□□□ -2.29
PRKNO60260 MIR3613-201ENST00000579844 87 ntBASIC0.73□□□□□ -2.29
PRKNO60260 MIR6082-201ENST00000613604 109 ntBASIC0.73□□□□□ -2.29
PRKNO60260 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
PRKNO60260 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
PRKNO60260 Y_RNA.119-201ENST00000363301 96 ntBASIC0.72□□□□□ -2.29
PRKNO60260 Y_RNA.205-201ENST00000364128 113 ntBASIC0.72□□□□□ -2.29
PRKNO60260 RNU6-531P-201ENST00000516694 104 ntBASIC0.72□□□□□ -2.29
PRKNO60260 RNU6-537P-201ENST00000517277 103 ntBASIC0.72□□□□□ -2.29
PRKNO60260 AC090897.1-201ENST00000580909 226 ntBASIC0.72□□□□□ -2.29
PRKNO60260 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
PRKNO60260 SNORD38.1-201ENST00000363863 68 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 326.8 ms