Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 Y_RNA.170-201ENST00000363746 110 ntBASIC0.34□□□□□ -2.36
O00370 RNU6-647P-201ENST00000364243 107 ntBASIC0.34□□□□□ -2.36
O00370 Y_RNA.555-201ENST00000384673 110 ntBASIC0.34□□□□□ -2.36
O00370 MIR759-201ENST00000390224 91 ntBASIC0.34□□□□□ -2.36
O00370 RNU6-1307P-201ENST00000391012 103 ntBASIC0.34□□□□□ -2.36
O00370 RN7SKP19-201ENST00000516016 252 ntBASIC0.34□□□□□ -2.36
O00370 RNU7-2P-201ENST00000516096 62 ntBASIC0.34□□□□□ -2.36
O00370 U7.2-201ENST00000607576 63 ntBASIC0.34□□□□□ -2.36
O00370 Y_RNA.213-201ENST00000364178 111 ntBASIC0.33□□□□□ -2.36
O00370 MIR548L-201ENST00000408303 86 ntBASIC0.33□□□□□ -2.36
O00370 BX276092.1-201ENST00000427368 251 ntBASIC0.33□□□□□ -2.36
O00370 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
O00370 RNU6-1061P-201ENST00000516530 99 ntBASIC0.33□□□□□ -2.36
O00370 RNU6-135P-201ENST00000516769 101 ntBASIC0.33□□□□□ -2.36
O00370 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
O00370 MIR3668-201ENST00000582138 75 ntBASIC0.33□□□□□ -2.36
O00370 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
O00370 MIR3163-201ENST00000581592 73 ntBASIC0.32□□□□□ -2.36
O00370 AC244669.1-204ENST00000621564 178 ntBASIC0.32□□□□□ -2.36
O00370 Y_RNA.98-201ENST00000363109 102 ntBASIC0.31□□□□□ -2.36
O00370 SNORD115-24-201ENST00000363528 82 ntBASIC0.31□□□□□ -2.36
O00370 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
O00370 SNRPGP12-201ENST00000449481 213 ntBASIC0.31□□□□□ -2.36
O00370 RNU6-346P-201ENST00000516288 111 ntBASIC0.31□□□□□ -2.36
O00370 RNU6-781P-201ENST00000516377 101 ntBASIC0.31□□□□□ -2.36
O00370 SCARNA16.5-201ENST00000517114 183 ntBASIC0.31□□□□□ -2.36
O00370 MIR7107-201ENST00000611489 80 ntBASIC0.31□□□□□ -2.36
O00370 AP001340.1-201ENST00000624405 217 ntBASIC0.31□□□□□ -2.36
O00370 AP001362.1-201ENST00000625165 124 ntBASIC0.31□□□□□ -2.36
O00370 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
O00370 Y_RNA.343-201ENST00000365354 112 ntBASIC0.3□□□□□ -2.36
O00370 RNU6-429P-201ENST00000384582 108 ntBASIC0.3□□□□□ -2.36
O00370 SNORD28-201ENST00000384706 75 ntBASIC0.3□□□□□ -2.36
O00370 MT-TI-201ENST00000387365 69 ntBASIC0.3□□□□□ -2.36
O00370 AC073261.1-201ENST00000429409 121 ntBASIC0.3□□□□□ -2.36
O00370 RNU7-129P-201ENST00000516128 62 ntBASIC0.3□□□□□ -2.36
O00370 MIR548H5-201ENST00000580314 60 ntBASIC0.3□□□□□ -2.36
O00370 MIR4639-201ENST00000584938 69 ntBASIC0.3□□□□□ -2.36
O00370 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
O00370 Y_RNA.56-201ENST00000362798 112 ntBASIC0.29□□□□□ -2.36
O00370 Y_RNA.85-201ENST00000363014 111 ntBASIC0.29□□□□□ -2.36
O00370 Y_RNA.328-201ENST00000365208 113 ntBASIC0.29□□□□□ -2.36
O00370 Y_RNA.423-201ENST00000384057 113 ntBASIC0.29□□□□□ -2.36
O00370 Y_RNA.528-201ENST00000384575 108 ntBASIC0.29□□□□□ -2.36
O00370 AL158147.1-201ENST00000443970 75 ntBASIC0.29□□□□□ -2.36
O00370 AC069271.1-201ENST00000445577 156 ntBASIC0.29□□□□□ -2.36
O00370 RNU7-104P-201ENST00000459398 79 ntBASIC0.29□□□□□ -2.36
O00370 RNU7-200P-201ENST00000516105 62 ntBASIC0.29□□□□□ -2.36
O00370 RNA5SP47-201ENST00000517230 109 ntBASIC0.29□□□□□ -2.36
O00370 Y_RNA.773-201ENST00000607168 90 ntBASIC0.29□□□□□ -2.36
O00370 MIR376B-201ENST00000614515 100 ntBASIC0.29□□□□□ -2.36
O00370 MIR2909-201ENST00000617113 69 ntBASIC0.29□□□□□ -2.36
O00370 AC091304.10-201ENST00000641554 121 ntBASIC0.29□□□□□ -2.36
O00370 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
O00370 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
O00370 Y_RNA.180-201ENST00000363867 113 ntBASIC0.28□□□□□ -2.36
O00370 SNORD115-35-201ENST00000365122 82 ntBASIC0.28□□□□□ -2.36
O00370 RNU6-209P-201ENST00000384118 107 ntBASIC0.28□□□□□ -2.36
O00370 RNU6-255P-201ENST00000516957 105 ntBASIC0.28□□□□□ -2.36
O00370 AC138869.1-201ENST00000568623 124 ntBASIC0.28□□□□□ -2.36
O00370 AC087741.2-201ENST00000619415 172 ntBASIC0.28□□□□□ -2.36
O00370 TUG1_4.1-201ENST00000619464 181 ntBASIC0.28□□□□□ -2.36
O00370 RNA5SP257-201ENST00000363023 116 ntBASIC0.27□□□□□ -2.37
O00370 MIR635-201ENST00000384830 98 ntBASIC0.27□□□□□ -2.37
O00370 RNU6-735P-201ENST00000410612 107 ntBASIC0.27□□□□□ -2.37
O00370 RNA5SP136-201ENST00000410906 107 ntBASIC0.27□□□□□ -2.37
O00370 RNU6-1211P-201ENST00000459179 105 ntBASIC0.27□□□□□ -2.37
O00370 RNU6-521P-201ENST00000516663 105 ntBASIC0.27□□□□□ -2.37
O00370 RNU7-10P-201ENST00000607194 63 ntBASIC0.27□□□□□ -2.37
O00370 MIR1255B1-201ENST00000636325 63 ntBASIC0.27□□□□□ -2.37
O00370 Y_RNA.127-201ENST00000363386 109 ntBASIC0.26□□□□□ -2.37
O00370 Y_RNA.198-201ENST00000364013 98 ntBASIC0.26□□□□□ -2.37
O00370 Y_RNA.221-201ENST00000364248 96 ntBASIC0.26□□□□□ -2.37
O00370 RNU6-187P-201ENST00000384139 106 ntBASIC0.26□□□□□ -2.37
O00370 Y_RNA.464-201ENST00000384282 110 ntBASIC0.26□□□□□ -2.37
O00370 MIR34C-201ENST00000384831 77 ntBASIC0.26□□□□□ -2.37
O00370 SNORA40-201ENST00000388090 126 ntBASIC0.26□□□□□ -2.37
O00370 SNORA7.5-201ENST00000410672 110 ntBASIC0.26□□□□□ -2.37
O00370 MTND4LP9-201ENST00000427694 174 ntBASIC0.26□□□□□ -2.37
O00370 SNORA62.5-201ENST00000516634 120 ntBASIC0.26□□□□□ -2.37
O00370 MIR599-201ENST00000385069 95 ntBASIC0.25□□□□□ -2.37
O00370 RNU2-59P-201ENST00000410482 191 ntBASIC0.25□□□□□ -2.37
O00370 TRAJ51-201ENST00000504127 63 ntBASIC0.25□□□□□ -2.37
O00370 MIR4752-201ENST00000579672 72 ntBASIC0.25□□□□□ -2.37
O00370 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
O00370 AC023932.2-201ENST00000603176 175 ntBASIC0.24□□□□□ -2.37
O00370 AC025166.1-201ENST00000612411 163 ntBASIC0.24□□□□□ -2.37
O00370 RNU6-1099P-201ENST00000363533 107 ntBASIC0.23□□□□□ -2.37
O00370 RNU4-67P-201ENST00000364569 141 ntBASIC0.23□□□□□ -2.37
O00370 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
O00370 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
O00370 MIR548D2-201ENST00000384955 97 ntBASIC0.23□□□□□ -2.37
O00370 RNU6-907P-201ENST00000390924 102 ntBASIC0.23□□□□□ -2.37
O00370 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.23□□□□□ -2.37
O00370 MTND5P40-201ENST00000559945 246 ntBASIC0.23□□□□□ -2.37
O00370 AL512310.12-203ENST00000640543 90 ntBASIC0.23□□□□□ -2.37
O00370 SNORD115-19-201ENST00000363098 82 ntBASIC0.22□□□□□ -2.37
O00370 SNORD115-18-201ENST00000363293 82 ntBASIC0.22□□□□□ -2.37
O00370 SNORD115-17-201ENST00000364612 82 ntBASIC0.22□□□□□ -2.37
O00370 Y_RNA.280-201ENST00000364765 112 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms