Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SNORD93-201ENST00000408813 74 ntBASIC2.46□□□□□ -2.02
H3BM21 MIR1302-7-201ENST00000408841 72 ntBASIC2.46□□□□□ -2.02
H3BM21 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.46□□□□□ -2.02
H3BM21 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
H3BM21 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
H3BM21 AC023934.1-201ENST00000574529 2389 ntBASIC2.45□□□□□ -2.02
H3BM21 U8.2-201ENST00000363156 134 ntBASIC2.45□□□□□ -2.02
H3BM21 RNU4-53P-201ENST00000410828 140 ntBASIC2.45□□□□□ -2.02
H3BM21 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
H3BM21 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
H3BM21 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.45□□□□□ -2.02
H3BM21 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
H3BM21 AC013244.2-201ENST00000603396 103 ntBASIC2.45□□□□□ -2.02
H3BM21 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
H3BM21 DEFA7P-201ENST00000382676 285 ntBASIC2.44□□□□□ -2.02
H3BM21 AL359511.1-201ENST00000402970 211 ntBASIC2.44□□□□□ -2.02
H3BM21 Y_RNA.697-201ENST00000516776 113 ntBASIC2.44□□□□□ -2.02
H3BM21 RNU6-122P-201ENST00000516818 107 ntBASIC2.44□□□□□ -2.02
H3BM21 AL078603.1-201ENST00000603824 313 ntBASIC2.44□□□□□ -2.02
H3BM21 MIR6895-201ENST00000613497 78 ntBASIC2.44□□□□□ -2.02
H3BM21 RNU6-1123P-201ENST00000362347 106 ntBASIC2.43□□□□□ -2.02
H3BM21 Y_RNA.56-201ENST00000362798 112 ntBASIC2.43□□□□□ -2.02
H3BM21 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
H3BM21 RNU1-36P-201ENST00000365130 165 ntBASIC2.43□□□□□ -2.02
H3BM21 Y_RNA.379-201ENST00000365653 102 ntBASIC2.43□□□□□ -2.02
H3BM21 MIR653-201ENST00000385279 96 ntBASIC2.43□□□□□ -2.02
H3BM21 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
H3BM21 AC097635.1-201ENST00000450678 155 ntBASIC2.43□□□□□ -2.02
H3BM21 snoU13.15-201ENST00000459407 104 ntBASIC2.43□□□□□ -2.02
H3BM21 RPL30P7-201ENST00000479312 323 ntBASIC2.43□□□□□ -2.02
H3BM21 MIR514B-201ENST00000516774 80 ntBASIC2.43□□□□□ -2.02
H3BM21 ZNF658B-202ENST00000615961 3375 ntBASIC2.43□□□□□ -2.02
H3BM21 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
H3BM21 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
H3BM21 MT-TN-201ENST00000387400 73 ntBASIC2.42□□□□□ -2.02
H3BM21 RNA5SP299-201ENST00000391203 116 ntBASIC2.42□□□□□ -2.02
H3BM21 SNORA3.2-201ENST00000408221 125 ntBASIC2.42□□□□□ -2.02
H3BM21 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
H3BM21 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
H3BM21 DEFB122-202ENST00000569013 197 ntBASIC2.42□□□□□ -2.02
H3BM21 AC015688.6-201ENST00000577737 104 ntBASIC2.42□□□□□ -2.02
H3BM21 MIR3192-201ENST00000584920 77 ntBASIC2.42□□□□□ -2.02
H3BM21 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
H3BM21 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
H3BM21 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
H3BM21 RNA5SP289-201ENST00000362332 137 ntBASIC2.41□□□□□ -2.02
H3BM21 RNA5SP465-201ENST00000391195 109 ntBASIC2.41□□□□□ -2.02
H3BM21 AL356320.1-201ENST00000429616 163 ntBASIC2.41□□□□□ -2.02
H3BM21 MIR5694-201ENST00000581190 76 ntBASIC2.41□□□□□ -2.02
H3BM21 AC073869.9-201ENST00000641610 120 ntBASIC2.41□□□□□ -2.02
H3BM21 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
H3BM21 RNU6-1312P-201ENST00000362425 108 ntBASIC2.4□□□□□ -2.03
H3BM21 U3.27-201ENST00000391237 200 ntBASIC2.4□□□□□ -2.03
H3BM21 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
H3BM21 RNU6-1265P-201ENST00000516342 103 ntBASIC2.4□□□□□ -2.03
H3BM21 MIR2115-201ENST00000516657 100 ntBASIC2.4□□□□□ -2.03
H3BM21 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
H3BM21 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
H3BM21 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
H3BM21 MIR599-201ENST00000385069 95 ntBASIC2.39□□□□□ -2.03
H3BM21 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
H3BM21 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
H3BM21 AC103810.8-201ENST00000607347 118 ntBASIC2.39□□□□□ -2.03
H3BM21 MIR1291-201ENST00000627649 87 ntBASIC2.39□□□□□ -2.03
H3BM21 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
H3BM21 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
H3BM21 RNU6-645P-201ENST00000364649 106 ntBASIC2.38□□□□□ -2.03
H3BM21 RNU6-1039P-201ENST00000383931 107 ntBASIC2.38□□□□□ -2.03
H3BM21 SNORD75.2-201ENST00000408784 58 ntBASIC2.38□□□□□ -2.03
H3BM21 RNA5SP501-201ENST00000410990 112 ntBASIC2.38□□□□□ -2.03
H3BM21 RNU6-92P-201ENST00000605893 104 ntBASIC2.38□□□□□ -2.03
H3BM21 MIR6509-201ENST00000614603 85 ntBASIC2.38□□□□□ -2.03
H3BM21 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
H3BM21 RNU6-753P-201ENST00000363926 107 ntBASIC2.37□□□□□ -2.03
H3BM21 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
H3BM21 RNU6-203P-201ENST00000384038 104 ntBASIC2.37□□□□□ -2.03
H3BM21 RNU1-52P-201ENST00000384190 164 ntBASIC2.37□□□□□ -2.03
H3BM21 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
H3BM21 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
H3BM21 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.37□□□□□ -2.03
H3BM21 RPL23AP42-201ENST00000471152 471 ntBASIC2.37□□□□□ -2.03
H3BM21 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
H3BM21 AC016717.2-201ENST00000609089 5141 ntBASIC2.36□□□□□ -2.03
H3BM21 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
H3BM21 MIR203A-201ENST00000384836 110 ntBASIC2.36□□□□□ -2.03
H3BM21 SNORA75.1-201ENST00000391130 148 ntBASIC2.36□□□□□ -2.03
H3BM21 snoU13.23-201ENST00000458863 104 ntBASIC2.36□□□□□ -2.03
H3BM21 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.36□□□□□ -2.03
H3BM21 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
H3BM21 Y_RNA.13-201ENST00000362403 112 ntBASIC2.35□□□□□ -2.03
H3BM21 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
H3BM21 SNORD41-201ENST00000386967 70 ntBASIC2.35□□□□□ -2.03
H3BM21 MIR18B-201ENST00000454574 71 ntBASIC2.35□□□□□ -2.03
H3BM21 RN7SL274P-201ENST00000492268 272 ntBASIC2.35□□□□□ -2.03
H3BM21 MIR6082-201ENST00000613604 109 ntBASIC2.35□□□□□ -2.03
H3BM21 MIR6516-201ENST00000630554 81 ntBASIC2.35□□□□□ -2.03
H3BM21 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
H3BM21 MIR377-201ENST00000362145 69 ntBASIC2.34□□□□□ -2.03
H3BM21 SNORD60.1-201ENST00000362451 73 ntBASIC2.34□□□□□ -2.03
H3BM21 RNU7-24P-201ENST00000458867 62 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms