Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MIR4796-201ENST00000580742 81 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 MIR3935-201ENST00000583472 104 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 Z97988.1-201ENST00000637697 135 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 Y_RNA.99-201ENST00000363138 105 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 Y_RNA.567-201ENST00000384736 106 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 RNU7-137P-201ENST00000516788 62 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 AC005786.1-201ENST00000588553 154 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 RNU6-23P-201ENST00000363283 107 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 SNORA25B-201ENST00000365507 128 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 RNU6-913P-201ENST00000390913 95 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 RNU6-1086P-201ENST00000410930 100 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 RNA5SP489-201ENST00000410986 109 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 SPINT5P-201ENST00000448174 155 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 MIR8066-201ENST00000617280 78 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 ZNF355P-201ENST00000427301 3216 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 MIRLET7A1-201ENST00000362295 80 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 SNORD115-3-201ENST00000363100 82 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 SNORA38-201ENST00000363946 132 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 VTRNA1-3-201ENST00000365645 89 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 RNU6-471P-201ENST00000383944 106 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 MIR154-201ENST00000385243 84 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 Y_RNA.596-201ENST00000410462 109 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 RNU7-85P-201ENST00000458851 63 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 AC023790.1-201ENST00000482174 347 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 RNA5SP82-201ENST00000516707 92 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 RNU6-1223P-201ENST00000517124 104 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 AP000753.3-201ENST00000604083 169 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
NOTCH3Q9UM47 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 Y_RNA.115-201ENST00000363272 98 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 RNU6-949P-201ENST00000384040 107 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 RNA5SP292-201ENST00000390974 118 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 RNU6-129P-201ENST00000391022 107 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 MTND4LP19-201ENST00000403051 166 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 RNU2-59P-201ENST00000410482 191 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 AL354695.1-201ENST00000427935 228 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 snoU13.27-201ENST00000459278 104 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 RNA5SP437-201ENST00000517249 129 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 AL096861.1-201ENST00000610899 123 ntBASIC1.19□□□□□ -2.22
NOTCH3Q9UM47 SNORD36A-201ENST00000362874 73 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 Y_RNA.532-201ENST00000384590 113 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RNU6-1031P-201ENST00000384773 107 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 MIR520C-201ENST00000385005 87 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 AL034345.1-201ENST00000407768 123 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 SNORA74.3-201ENST00000517108 154 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 MIR4421-201ENST00000578133 69 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 AC021506.2-201ENST00000612354 169 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 MIR6740-201ENST00000618268 113 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 SNORD38B-201ENST00000384690 67 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 MIR660-201ENST00000385235 97 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RNU4-37P-201ENST00000410214 84 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RPS27P21-201ENST00000486977 252 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RNU6-871P-201ENST00000516122 100 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RNU7-53P-201ENST00000516705 60 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RNU6-557P-201ENST00000516842 110 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 MIR4500-201ENST00000579472 76 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 SNORD38B-202ENST00000625943 69 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 MIR664A-201ENST00000626086 82 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 FO624990.1-201ENST00000636373 85 ntBASIC1.18□□□□□ -2.22
NOTCH3Q9UM47 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 SNRPGP12-201ENST00000449481 213 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 RNU7-43P-201ENST00000516554 64 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 RNA5SP364-201ENST00000516938 78 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 AC138749.4-201ENST00000563970 127 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 AL513423.1-201ENST00000621695 132 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 U6.109-201ENST00000636749 87 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 Y_RNA.12-201ENST00000362393 112 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 SNORD56.5-201ENST00000364281 72 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 RNU6-411P-201ENST00000384451 107 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 RNU6-663P-201ENST00000391105 106 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 RNU6-587P-201ENST00000391282 106 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 HMGN2P39-201ENST00000398005 273 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 RNU6-303P-201ENST00000517091 106 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 AC121758.2-201ENST00000553271 193 ntBASIC1.17□□□□□ -2.22
NOTCH3Q9UM47 MIRLET7F1-201ENST00000362202 87 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 RNA5SP393-201ENST00000363423 117 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 MIR516A2-201ENST00000384888 90 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 MIR516A1-201ENST00000385033 90 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 SNORA67.6-201ENST00000391093 99 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 RN7SL274P-201ENST00000492268 272 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 SNORD111.1-201ENST00000516421 86 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 AC008163.1-202ENST00000636004 2889 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 AC080100.1-201ENST00000624239 5356 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 RNU6-208P-201ENST00000362431 107 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 RNU6-461P-201ENST00000364195 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 247.8 ms