Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 MIR548I2-201ENST00000408348 149 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 RNU4-83P-201ENST00000410863 133 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 RNU7-2P-201ENST00000516096 62 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 RNU7-156P-201ENST00000517214 74 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 MIR96-201ENST00000362288 78 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 SNORA63.5-201ENST00000363548 123 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 Y_RNA.448-201ENST00000384185 108 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 RNU7-56P-201ENST00000458744 62 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-521P-201ENST00000516663 105 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 SNORA25.16-201ENST00000516741 121 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 MIR151B-201ENST00000584249 96 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 MIR6129-201ENST00000616087 109 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 U6.109-201ENST00000636749 87 ntBASIC0.86□□□□□ -2.27
SMARCAL1Q9NZC9 Y_RNA.35-201ENST00000362601 101 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNA5SP133-201ENST00000363368 119 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 SNORD115-35-201ENST00000365122 82 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-1144P-201ENST00000384247 104 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-364P-201ENST00000384387 107 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 SNORD116-21-201ENST00000384507 92 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 SNORA72.6-201ENST00000384520 129 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-1081P-201ENST00000384537 107 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-476P-201ENST00000384726 107 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 MIR938-201ENST00000401216 83 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-1064P-201ENST00000410626 104 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 SNORA7.5-201ENST00000410672 110 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNU7-102P-201ENST00000458948 62 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RPS29P1-201ENST00000465274 159 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 AC138749.4-201ENST00000563970 127 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 AC133485.1-201ENST00000567176 124 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 AC008608.1-201ENST00000603910 127 ntBASIC0.85□□□□□ -2.27
SMARCAL1Q9NZC9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.84□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-1290P-201ENST00000362957 109 ntBASIC0.84□□□□□ -2.27
SMARCAL1Q9NZC9 RNU4-67P-201ENST00000364569 141 ntBASIC0.84□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-429P-201ENST00000384582 108 ntBASIC0.84□□□□□ -2.27
SMARCAL1Q9NZC9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
SMARCAL1Q9NZC9 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
SMARCAL1Q9NZC9 MIR6767-201ENST00000637302 66 ntBASIC0.84□□□□□ -2.27
SMARCAL1Q9NZC9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.291-201ENST00000364886 113 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 MIR520E-201ENST00000384867 87 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 MIR520H-201ENST00000385126 88 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-816P-201ENST00000390914 107 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1268P-201ENST00000391214 107 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1239P-201ENST00000391310 107 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 RNU7-48P-201ENST00000458875 63 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-531P-201ENST00000516694 104 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 MIR4679-2-201ENST00000578358 77 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 SNORD92-201ENST00000585078 85 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 MIR8066-201ENST00000617280 78 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.83□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-363P-201ENST00000362895 105 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.155-201ENST00000363632 101 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1056P-201ENST00000383996 107 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 MIR605-201ENST00000385078 83 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 SNORD105-201ENST00000386910 85 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU1-119P-201ENST00000391122 165 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-447P-201ENST00000410293 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-355P-201ENST00000410427 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-791P-201ENST00000410467 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-705P-201ENST00000410601 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-860P-201ENST00000410860 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-785P-201ENST00000411324 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 RPL39P34-201ENST00000477141 156 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 DEFB131E-201ENST00000532329 154 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 MIR548AI-201ENST00000579940 88 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 AL136317.1-201ENST00000612653 226 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 U6.90-201ENST00000614007 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 MIR376B-201ENST00000614515 100 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 MIR6515-201ENST00000619843 57 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 U6.70-201ENST00000620287 104 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 AL162726.3-218ENST00000636401 95 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.82□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-865P-201ENST00000364772 107 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.507-201ENST00000384500 99 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-880P-201ENST00000384526 107 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 256.2 ms