Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 Y_RNA.29-201ENST00000362570 113 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 Y_RNA.119-201ENST00000363301 96 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 Y_RNA.257-201ENST00000364596 102 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 RNY1P2-201ENST00000364820 117 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 RNU4-11P-201ENST00000365287 132 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 MT-TI-201ENST00000387365 69 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 RNU6-460P-201ENST00000391158 108 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 AL603914.1-201ENST00000401964 204 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 DEFB131E-201ENST00000532329 154 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 AC112693.2-201ENST00000556538 232 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 MIR6755-201ENST00000619993 66 ntBASIC0.25□□□□□ -2.37
ELL3Q9HB65 SNORD114-10-201ENST00000363409 72 ntBASIC0.24□□□□□ -2.37
ELL3Q9HB65 Y_RNA.174-201ENST00000363781 105 ntBASIC0.24□□□□□ -2.37
ELL3Q9HB65 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
ELL3Q9HB65 RNU6-1321P-201ENST00000390905 107 ntBASIC0.24□□□□□ -2.37
ELL3Q9HB65 AC244669.1-204ENST00000621564 178 ntBASIC0.24□□□□□ -2.37
ELL3Q9HB65 RNU6-151P-201ENST00000364158 107 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 RNU6-187P-201ENST00000384139 106 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 Y_RNA.785-201ENST00000384290 109 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 RNU4-69P-201ENST00000410677 143 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 RNU6-394P-201ENST00000410735 107 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 SNORD71-201ENST00000411292 86 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 AC108059.2-201ENST00000434626 151 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 RNU5E-3P-201ENST00000515913 68 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 RNU6-1194P-201ENST00000516208 104 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 RNU6-469P-201ENST00000516253 101 ntBASIC0.23□□□□□ -2.37
ELL3Q9HB65 RNU4-58P-201ENST00000363192 141 ntBASIC0.22□□□□□ -2.37
ELL3Q9HB65 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
ELL3Q9HB65 SNORD18B-201ENST00000365659 72 ntBASIC0.22□□□□□ -2.37
ELL3Q9HB65 MIR206-201ENST00000384872 86 ntBASIC0.22□□□□□ -2.37
ELL3Q9HB65 RNY4P20-201ENST00000516678 93 ntBASIC0.22□□□□□ -2.37
ELL3Q9HB65 SCARNA16.5-201ENST00000517114 183 ntBASIC0.22□□□□□ -2.37
ELL3Q9HB65 MIR3121-201ENST00000579680 77 ntBASIC0.22□□□□□ -2.37
ELL3Q9HB65 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.22□□□□□ -2.37
ELL3Q9HB65 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
ELL3Q9HB65 SNORD114-23-201ENST00000363536 72 ntBASIC0.21□□□□□ -2.38
ELL3Q9HB65 RNU6-804P-201ENST00000384286 107 ntBASIC0.21□□□□□ -2.38
ELL3Q9HB65 PCNPP3-201ENST00000393579 471 ntBASIC0.21□□□□□ -2.38
ELL3Q9HB65 MIR4639-201ENST00000584938 69 ntBASIC0.21□□□□□ -2.38
ELL3Q9HB65 AL137067.1-201ENST00000615933 120 ntBASIC0.21□□□□□ -2.38
ELL3Q9HB65 TUG1_4.1-201ENST00000619464 181 ntBASIC0.21□□□□□ -2.38
ELL3Q9HB65 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.21□□□□□ -2.38
ELL3Q9HB65 Y_RNA.294-201ENST00000364916 102 ntBASIC0.2□□□□□ -2.38
ELL3Q9HB65 RNU2-59P-201ENST00000410482 191 ntBASIC0.2□□□□□ -2.38
ELL3Q9HB65 Y_RNA.700-201ENST00000516806 100 ntBASIC0.2□□□□□ -2.38
ELL3Q9HB65 MIR4752-201ENST00000579672 72 ntBASIC0.2□□□□□ -2.38
ELL3Q9HB65 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
ELL3Q9HB65 Y_RNA.778-201ENST00000620203 90 ntBASIC0.2□□□□□ -2.38
ELL3Q9HB65 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.2□□□□□ -2.38
ELL3Q9HB65 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
ELL3Q9HB65 Y_RNA.49-201ENST00000362714 112 ntBASIC0.19□□□□□ -2.38
ELL3Q9HB65 Y_RNA.448-201ENST00000384185 108 ntBASIC0.19□□□□□ -2.38
ELL3Q9HB65 RNU6-616P-201ENST00000384353 107 ntBASIC0.19□□□□□ -2.38
ELL3Q9HB65 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
ELL3Q9HB65 RNA5SP227-201ENST00000516184 113 ntBASIC0.19□□□□□ -2.38
ELL3Q9HB65 RNU6-1232P-201ENST00000516299 86 ntBASIC0.19□□□□□ -2.38
ELL3Q9HB65 RNU1-29P-201ENST00000606574 126 ntBASIC0.19□□□□□ -2.38
ELL3Q9HB65 Y_RNA.56-201ENST00000362798 112 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 SNORD116-18-201ENST00000383961 92 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 RNY1P4-201ENST00000384595 115 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 Y_RNA.580-201ENST00000391004 95 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 RNU7-161P-201ENST00000517289 62 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 AC098479.1-201ENST00000609225 154 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 AC087741.2-201ENST00000619415 172 ntBASIC0.18□□□□□ -2.38
ELL3Q9HB65 MIR101-2-201ENST00000362195 79 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 Y_RNA.8-201ENST00000362353 102 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 Y_RNA.150-201ENST00000363562 102 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 RNU6-915P-201ENST00000364943 103 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 RNU6-449P-201ENST00000383914 107 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 Y_RNA.398-201ENST00000383952 99 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 Y_RNA.423-201ENST00000384057 113 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 RNU6-429P-201ENST00000384582 108 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 MIRLET7F2-201ENST00000385277 83 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 AC244505.6-201ENST00000452829 130 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 TRAJ51-201ENST00000504127 63 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 RNA5SP272-201ENST00000516095 111 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 MTND5P41-201ENST00000517498 206 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 MIR3144-201ENST00000579460 79 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 MIR4500-201ENST00000579472 76 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 AC091304.10-201ENST00000641554 121 ntBASIC0.17□□□□□ -2.38
ELL3Q9HB65 SNORD115-24-201ENST00000363528 82 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 RNU6-1229P-201ENST00000364295 107 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 Y_RNA.299-201ENST00000364973 94 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 RNU6-716P-201ENST00000365621 103 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 RNU6-135P-201ENST00000516769 101 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 RN7SL793P-201ENST00000583259 296 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 Y_RNA.773-201ENST00000607168 90 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
ELL3Q9HB65 Y_RNA.114-201ENST00000363265 113 ntBASIC0.15□□□□□ -2.39
ELL3Q9HB65 RNU6-726P-201ENST00000364680 107 ntBASIC0.15□□□□□ -2.39
ELL3Q9HB65 RNU6-1126P-201ENST00000384002 107 ntBASIC0.15□□□□□ -2.39
ELL3Q9HB65 BX276092.1-201ENST00000427368 251 ntBASIC0.15□□□□□ -2.39
ELL3Q9HB65 RNU7-48P-201ENST00000458875 63 ntBASIC0.15□□□□□ -2.39
ELL3Q9HB65 RNU7-2P-201ENST00000516096 62 ntBASIC0.15□□□□□ -2.39
ELL3Q9HB65 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms