Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.55□□□□□ -2.5
USP47Q96K76 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.55□□□□□ -2.5
USP47Q96K76 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.56□□□□□ -2.5
USP47Q96K76 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.56□□□□□ -2.5
USP47Q96K76 SNORD114-10-201ENST00000363409 72 ntBASIC-0.56□□□□□ -2.5
USP47Q96K76 AL359881.1-201ENST00000602916 267 ntBASIC-0.56□□□□□ -2.5
USP47Q96K76 RNU7-10P-201ENST00000607194 63 ntBASIC-0.56□□□□□ -2.5
USP47Q96K76 AC098479.1-201ENST00000609225 154 ntBASIC-0.56□□□□□ -2.5
USP47Q96K76 MIR548AZ-201ENST00000616567 95 ntBASIC-0.56□□□□□ -2.5
USP47Q96K76 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 RNU4-17P-201ENST00000365598 141 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 MIR196A2-201ENST00000385189 110 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 SNORD126-201ENST00000459475 77 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 NAMPTP3-201ENST00000569273 224 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 MIR4744-201ENST00000581563 82 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 MIR4723-201ENST00000585070 81 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 RNU6-103P-201ENST00000363686 107 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 MIR1468-201ENST00000410600 86 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 RNU4-63P-201ENST00000411313 118 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 SNX3P1X-201ENST00000414887 175 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 BX276092.1-201ENST00000427368 251 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 MIR3666-201ENST00000607845 111 ntBASIC-0.57□□□□□ -2.5
USP47Q96K76 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 RNU6-509P-201ENST00000363519 107 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 RNU6-449P-201ENST00000383914 107 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 MIR599-201ENST00000385069 95 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 TRAJ51-201ENST00000504127 63 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 MIR4500-201ENST00000579472 76 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 MIR548AE2-201ENST00000583456 67 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 MIR4282-201ENST00000583613 67 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 MTND4P29-201ENST00000503122 1372 ntBASIC-0.58□□□□□ -2.5
USP47Q96K76 RNU6-865P-201ENST00000364772 107 ntBASIC-0.59□□□□□ -2.5
USP47Q96K76 MIR516B1-201ENST00000385211 90 ntBASIC-0.59□□□□□ -2.5
USP47Q96K76 RNA5SP484-201ENST00000458857 111 ntBASIC-0.59□□□□□ -2.5
USP47Q96K76 IGKV1-22-201ENST00000524313 326 ntBASIC-0.59□□□□□ -2.5
USP47Q96K76 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
USP47Q96K76 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.59□□□□□ -2.5
USP47Q96K76 uc_338.36-201ENST00000622331 158 ntBASIC-0.59□□□□□ -2.5
USP47Q96K76 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.59□□□□□ -2.5
USP47Q96K76 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.6□□□□□ -2.51
USP47Q96K76 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.6□□□□□ -2.51
USP47Q96K76 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.6□□□□□ -2.51
USP47Q96K76 RNA5SP300-201ENST00000391197 107 ntBASIC-0.6□□□□□ -2.51
USP47Q96K76 AC022028.1-201ENST00000412054 408 ntBASIC-0.6□□□□□ -2.51
USP47Q96K76 RN7SL660P-201ENST00000614852 299 ntBASIC-0.6□□□□□ -2.51
USP47Q96K76 U2.14-201ENST00000615943 113 ntBASIC-0.6□□□□□ -2.51
USP47Q96K76 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.61□□□□□ -2.51
USP47Q96K76 SNORD14C-201ENST00000365382 88 ntBASIC-0.61□□□□□ -2.51
USP47Q96K76 RNY3P14-201ENST00000384309 102 ntBASIC-0.61□□□□□ -2.51
USP47Q96K76 MIR876-201ENST00000401147 81 ntBASIC-0.61□□□□□ -2.51
USP47Q96K76 RNU6-138P-201ENST00000515952 107 ntBASIC-0.61□□□□□ -2.51
USP47Q96K76 MIR4680-201ENST00000580906 66 ntBASIC-0.61□□□□□ -2.51
USP47Q96K76 FTX_2.1-201ENST00000618816 94 ntBASIC-0.61□□□□□ -2.51
USP47Q96K76 AL162726.3-218ENST00000636401 95 ntBASIC-0.61□□□□□ -2.51
USP47Q96K76 MIR148A-201ENST00000362215 68 ntBASIC-0.62□□□□□ -2.51
USP47Q96K76 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.62□□□□□ -2.51
USP47Q96K76 RNU6-578P-201ENST00000390980 103 ntBASIC-0.62□□□□□ -2.51
USP47Q96K76 SNORA25.13-201ENST00000516395 103 ntBASIC-0.62□□□□□ -2.51
USP47Q96K76 SNORA25.7-201ENST00000364375 127 ntBASIC-0.63□□□□□ -2.51
USP47Q96K76 AC109327.2-201ENST00000448339 378 ntBASIC-0.63□□□□□ -2.51
USP47Q96K76 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.63□□□□□ -2.51
USP47Q96K76 AC134503.1-201ENST00000633048 54 ntBASIC-0.63□□□□□ -2.51
USP47Q96K76 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.64□□□□□ -2.51
USP47Q96K76 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.64□□□□□ -2.51
USP47Q96K76 MIR4788-201ENST00000639104 80 ntBASIC-0.64□□□□□ -2.51
USP47Q96K76 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.65□□□□□ -2.51
USP47Q96K76 RNU6-690P-201ENST00000365242 106 ntBASIC-0.65□□□□□ -2.51
USP47Q96K76 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.65□□□□□ -2.51
USP47Q96K76 AC097635.1-201ENST00000450678 155 ntBASIC-0.65□□□□□ -2.51
USP47Q96K76 RNU2-35P-201ENST00000516446 142 ntBASIC-0.65□□□□□ -2.51
USP47Q96K76 MIR3920-201ENST00000581751 86 ntBASIC-0.65□□□□□ -2.51
USP47Q96K76 MIR4263-201ENST00000584745 83 ntBASIC-0.65□□□□□ -2.51
USP47Q96K76 AL160413.1-201ENST00000622780 310 ntBASIC-0.65□□□□□ -2.51
USP47Q96K76 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.65□□□□□ -2.51
USP47Q96K76 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.66□□□□□ -2.51
USP47Q96K76 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.66□□□□□ -2.51
USP47Q96K76 SNORD75.1-201ENST00000408373 60 ntBASIC-0.66□□□□□ -2.51
USP47Q96K76 RNU6-284P-201ENST00000411105 106 ntBASIC-0.66□□□□□ -2.51
USP47Q96K76 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.66□□□□□ -2.51
USP47Q96K76 MIR335-201ENST00000362173 94 ntBASIC-0.67□□□□□ -2.52
USP47Q96K76 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.67□□□□□ -2.52
USP47Q96K76 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.67□□□□□ -2.52
USP47Q96K76 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.67□□□□□ -2.52
USP47Q96K76 MTATP6P23-201ENST00000440153 476 ntBASIC-0.67□□□□□ -2.52
USP47Q96K76 RNY3P16-201ENST00000516338 101 ntBASIC-0.67□□□□□ -2.52
USP47Q96K76 RNU2-4P-201ENST00000606190 192 ntBASIC-0.67□□□□□ -2.52
USP47Q96K76 MIR6507-201ENST00000613630 70 ntBASIC-0.67□□□□□ -2.52
USP47Q96K76 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 MIR548P-201ENST00000408336 84 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 RNU7-48P-201ENST00000458875 63 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 MIR1270-201ENST00000459320 83 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 RNU7-13P-201ENST00000516413 62 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 MIR4643-201ENST00000577473 78 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 MIR3171-201ENST00000584270 74 ntBASIC-0.68□□□□□ -2.52
USP47Q96K76 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.69□□□□□ -2.52
USP47Q96K76 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.69□□□□□ -2.52
USP47Q96K76 U8.6-201ENST00000364939 135 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms