Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MIR4771-1-201ENST00000582617 74 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 AL589743.1-201ENST00000551932 2712 ntBASIC1.34□□□□□ -2.2
SMC1BQ8NDV3 AC023934.1-201ENST00000574529 2389 ntBASIC1.33□□□□□ -2.2
SMC1BQ8NDV3 RNU6-1290P-201ENST00000362957 109 ntBASIC1.33□□□□□ -2.2
SMC1BQ8NDV3 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
SMC1BQ8NDV3 FABP5P4-201ENST00000437203 171 ntBASIC1.33□□□□□ -2.2
SMC1BQ8NDV3 snoU13.21-201ENST00000459368 105 ntBASIC1.33□□□□□ -2.2
SMC1BQ8NDV3 RNU7-137P-201ENST00000516788 62 ntBASIC1.33□□□□□ -2.2
SMC1BQ8NDV3 MIR1-1-201ENST00000362147 71 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 SNORD93-201ENST00000408813 74 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-447P-201ENST00000410293 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-355P-201ENST00000410427 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-791P-201ENST00000410467 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-705P-201ENST00000410601 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-860P-201ENST00000410860 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU6-785P-201ENST00000411324 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RPS26P5-201ENST00000418544 335 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RPS29P28-201ENST00000446439 141 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU7-185P-201ENST00000459215 60 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RPL39P34-201ENST00000477141 156 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 AC133485.1-201ENST00000567176 124 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 AL136317.1-201ENST00000612653 226 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 U6.90-201ENST00000614007 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 U6.70-201ENST00000620287 104 ntBASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
SMC1BQ8NDV3 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
SMC1BQ8NDV3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.31□□□□□ -2.2
SMC1BQ8NDV3 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
SMC1BQ8NDV3 RNU7-2P-201ENST00000516096 62 ntBASIC1.31□□□□□ -2.2
SMC1BQ8NDV3 Y_RNA.35-201ENST00000362601 101 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 SNORA63.5-201ENST00000363548 123 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 MIR100-201ENST00000385259 80 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 U8.15-201ENST00000390947 134 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 MIR1912-201ENST00000410389 80 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 MIR6857-201ENST00000613267 93 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 MIR6129-201ENST00000616087 109 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 AL162726.3-218ENST00000636401 95 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 AC010487.4-201ENST00000637027 61 ntBASIC1.3□□□□□ -2.2
SMC1BQ8NDV3 AL391516.1-201ENST00000554380 2449 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 SNORD114-23-201ENST00000363536 72 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 SNORD114-24-201ENST00000365029 72 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 SNORD115-35-201ENST00000365122 82 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 MIR206-201ENST00000384872 86 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 RNU6-816P-201ENST00000390914 107 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 MIR942-201ENST00000401111 86 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 AC105081.1-201ENST00000617727 106 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 AL035470.1-201ENST00000622571 220 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.29□□□□□ -2.2
SMC1BQ8NDV3 RNU4-67P-201ENST00000364569 141 ntBASIC1.28□□□□□ -2.2
SMC1BQ8NDV3 RNU1-36P-201ENST00000365130 165 ntBASIC1.28□□□□□ -2.2
SMC1BQ8NDV3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.28□□□□□ -2.2
SMC1BQ8NDV3 RNU6-977P-201ENST00000516411 103 ntBASIC1.28□□□□□ -2.2
SMC1BQ8NDV3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.28□□□□□ -2.2
SMC1BQ8NDV3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.28□□□□□ -2.2
SMC1BQ8NDV3 MIR1255B1-201ENST00000636325 63 ntBASIC1.28□□□□□ -2.2
SMC1BQ8NDV3 RNU6-363P-201ENST00000362895 105 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 RNU6-865P-201ENST00000364772 107 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 RNU6-409P-201ENST00000384114 104 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 MIR125B2-201ENST00000385128 89 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 MIR1827-201ENST00000408549 66 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 SNORD124-201ENST00000459577 104 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 RNU6-521P-201ENST00000516663 105 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 MIR3973-201ENST00000579824 107 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 MIR4676-201ENST00000583078 72 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 MIR6513-201ENST00000621188 64 ntBASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.27□□□□□ -2.21
SMC1BQ8NDV3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.26□□□□□ -2.21
SMC1BQ8NDV3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.26□□□□□ -2.21
SMC1BQ8NDV3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.26□□□□□ -2.21
SMC1BQ8NDV3 RNU4-83P-201ENST00000410863 133 ntBASIC1.26□□□□□ -2.21
SMC1BQ8NDV3 AC015818.7-201ENST00000428754 109 ntBASIC1.26□□□□□ -2.21
SMC1BQ8NDV3 AC087499.7-201ENST00000441958 109 ntBASIC1.26□□□□□ -2.21
SMC1BQ8NDV3 MIR8087-201ENST00000612745 78 ntBASIC1.26□□□□□ -2.21
SMC1BQ8NDV3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
SMC1BQ8NDV3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 RNU6-364P-201ENST00000384387 107 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 RNU6-429P-201ENST00000384582 108 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 MIR938-201ENST00000401216 83 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 RNU7-48P-201ENST00000458875 63 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 U7.7-201ENST00000459276 60 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 MIR4714-201ENST00000580728 77 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms