Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR548H5-201ENST00000580314 60 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 GHRLOS.1-201ENST00000610995 70 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 AC080100.1-201ENST00000624239 5356 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 MIR101-2-201ENST00000362195 79 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 RNU6-987P-201ENST00000384759 104 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 MTND4LP19-201ENST00000403051 166 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 RNA5SP425-201ENST00000410336 112 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 RNA5SP247-201ENST00000411181 105 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 JTBP1-201ENST00000441314 247 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 AL133373.1-201ENST00000497098 94 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 RNU11-2P-201ENST00000516898 142 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 MIR4529-201ENST00000578110 78 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 AC005520.4-201ENST00000604337 90 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 MIR6516-201ENST00000630554 81 ntBASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SCUBE3Q8IX30 RNU6-403P-201ENST00000363163 104 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 RNA5SP456-201ENST00000364002 114 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 RNU1-36P-201ENST00000365130 165 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 MIR519A1-201ENST00000385257 85 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 RNU4-37P-201ENST00000410214 84 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 SNORA31.25-201ENST00000517242 134 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 MIR4648-201ENST00000580107 72 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 MIR3675-201ENST00000583661 73 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 TRDV1-202ENST00000621643 102 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SCUBE3Q8IX30 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 MIR377-201ENST00000362145 69 ntBASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 RNU6-664P-201ENST00000362381 107 ntBASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 RNU6-1260P-201ENST00000362944 107 ntBASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 RNA5SP393-201ENST00000363423 117 ntBASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 U8.13-201ENST00000390842 128 ntBASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 Y_RNA.606-201ENST00000410579 103 ntBASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 AL591806.2-201ENST00000433122 173 ntBASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.61□□□□□ -1.99
SCUBE3Q8IX30 RNU6-630P-201ENST00000391258 106 ntBASIC2.6□□□□□ -1.99
SCUBE3Q8IX30 Y_RNA.809-201ENST00000516058 95 ntBASIC2.6□□□□□ -1.99
SCUBE3Q8IX30 RNU6-947P-201ENST00000516264 106 ntBASIC2.6□□□□□ -1.99
SCUBE3Q8IX30 RNU6-548P-201ENST00000517083 115 ntBASIC2.6□□□□□ -1.99
SCUBE3Q8IX30 AC013244.2-201ENST00000603396 103 ntBASIC2.6□□□□□ -1.99
SCUBE3Q8IX30 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
SCUBE3Q8IX30 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SCUBE3Q8IX30 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SCUBE3Q8IX30 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 Y_RNA.56-201ENST00000362798 112 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 RNU6-580P-201ENST00000365159 107 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 AC244636.1-201ENST00000421152 228 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 SUMO1P4-201ENST00000429430 302 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 snoU13.25-201ENST00000458945 104 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 AP003716.2-201ENST00000528260 108 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 MIR4696-201ENST00000581431 70 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 SNRPGP19-201ENST00000603826 189 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -1.99
SCUBE3Q8IX30 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.59□□□□□ -2
SCUBE3Q8IX30 SNORD101-201ENST00000384027 73 ntBASIC2.58□□□□□ -2
SCUBE3Q8IX30 RNU6-895P-201ENST00000384125 103 ntBASIC2.58□□□□□ -2
SCUBE3Q8IX30 AL359511.1-201ENST00000402970 211 ntBASIC2.58□□□□□ -2
SCUBE3Q8IX30 RNU4-53P-201ENST00000410828 140 ntBASIC2.58□□□□□ -2
SCUBE3Q8IX30 AL606490.4-201ENST00000423117 127 ntBASIC2.58□□□□□ -2
SCUBE3Q8IX30 RNU2-19P-201ENST00000517288 84 ntBASIC2.58□□□□□ -2
SCUBE3Q8IX30 MIR3140-201ENST00000583685 90 ntBASIC2.58□□□□□ -2
SCUBE3Q8IX30 ZNF209P-201ENST00000593450 2304 ntBASIC2.58□□□□□ -2
SCUBE3Q8IX30 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SCUBE3Q8IX30 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCUBE3Q8IX30 MIR764-201ENST00000390811 85 ntBASIC2.57□□□□□ -2
SCUBE3Q8IX30 MIR1185-1-201ENST00000408598 86 ntBASIC2.57□□□□□ -2
SCUBE3Q8IX30 AC097510.1-201ENST00000510945 133 ntBASIC2.57□□□□□ -2
SCUBE3Q8IX30 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.57□□□□□ -2
SCUBE3Q8IX30 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCUBE3Q8IX30 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCUBE3Q8IX30 RNU6-250P-201ENST00000516958 103 ntBASIC2.56□□□□□ -2
SCUBE3Q8IX30 RNA5SP212-201ENST00000391223 107 ntBASIC2.55□□□□□ -2
SCUBE3Q8IX30 AC092628.1-201ENST00000436250 252 ntBASIC2.55□□□□□ -2
SCUBE3Q8IX30 RNU7-193P-201ENST00000516723 65 ntBASIC2.55□□□□□ -2
SCUBE3Q8IX30 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.55□□□□□ -2
SCUBE3Q8IX30 MIR8053-201ENST00000613344 75 ntBASIC2.55□□□□□ -2
SCUBE3Q8IX30 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCUBE3Q8IX30 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCUBE3Q8IX30 RNA5SP264-201ENST00000363115 107 ntBASIC2.54□□□□□ -2
SCUBE3Q8IX30 SNORA3A-201ENST00000364113 130 ntBASIC2.54□□□□□ -2
SCUBE3Q8IX30 RNU6-654P-201ENST00000364373 107 ntBASIC2.54□□□□□ -2
SCUBE3Q8IX30 RNU6-499P-201ENST00000365615 107 ntBASIC2.54□□□□□ -2
SCUBE3Q8IX30 MIR9-2-201ENST00000384838 87 ntBASIC2.54□□□□□ -2
SCUBE3Q8IX30 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.54□□□□□ -2
SCUBE3Q8IX30 MIR1289-2-201ENST00000408360 111 ntBASIC2.54□□□□□ -2
SCUBE3Q8IX30 RN7SKP223-201ENST00000410582 62 ntBASIC2.54□□□□□ -2
SCUBE3Q8IX30 MIR5089-201ENST00000580047 84 ntBASIC2.54□□□□□ -2
SCUBE3Q8IX30 AL596028.1-201ENST00000326971 197 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 RNA5SP289-201ENST00000362332 137 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 SNORA25.4-201ENST00000363666 124 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 RNA5SP95-201ENST00000410319 137 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms