Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU7-137P-201ENST00000516788 62 ntBASIC0.07□□□□□ -2.4
PRPF39Q86UA1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.07□□□□□ -2.4
PRPF39Q86UA1 SNORD114-10-201ENST00000363409 72 ntBASIC0.06□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.193-201ENST00000363979 102 ntBASIC0.06□□□□□ -2.4
PRPF39Q86UA1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
PRPF39Q86UA1 SNORD37.2-201ENST00000391075 66 ntBASIC0.06□□□□□ -2.4
PRPF39Q86UA1 PCNPP3-201ENST00000393579 471 ntBASIC0.06□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.793-201ENST00000411222 111 ntBASIC0.06□□□□□ -2.4
PRPF39Q86UA1 AC138749.4-201ENST00000563970 127 ntBASIC0.06□□□□□ -2.4
PRPF39Q86UA1 AC105081.1-201ENST00000617727 106 ntBASIC0.06□□□□□ -2.4
PRPF39Q86UA1 RNA5SP245-201ENST00000364239 121 ntBASIC0.05□□□□□ -2.4
PRPF39Q86UA1 MIR760-201ENST00000390220 80 ntBASIC0.05□□□□□ -2.4
PRPF39Q86UA1 RNU7-164P-201ENST00000459221 62 ntBASIC0.05□□□□□ -2.4
PRPF39Q86UA1 RNU2-35P-201ENST00000516446 142 ntBASIC0.05□□□□□ -2.4
PRPF39Q86UA1 MIR4752-201ENST00000579672 72 ntBASIC0.05□□□□□ -2.4
PRPF39Q86UA1 MIR4503-201ENST00000582187 83 ntBASIC0.05□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 SNORD115-24-201ENST00000363528 82 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.233-201ENST00000364407 101 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.280-201ENST00000364765 112 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 RNU6-588P-201ENST00000410281 105 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 RNU6-1219P-201ENST00000516143 112 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 MIR3149-201ENST00000584629 83 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
PRPF39Q86UA1 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.497-201ENST00000384447 98 ntBASIC0.03□□□□□ -2.4
PRPF39Q86UA1 MIR3646-201ENST00000578301 84 ntBASIC0.03□□□□□ -2.4
PRPF39Q86UA1 MIR548H5-201ENST00000580314 60 ntBASIC0.03□□□□□ -2.4
PRPF39Q86UA1 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
PRPF39Q86UA1 Y_RNA.299-201ENST00000364973 94 ntBASIC0.02□□□□□ -2.41
PRPF39Q86UA1 Y_RNA.366-201ENST00000365540 102 ntBASIC0.02□□□□□ -2.41
PRPF39Q86UA1 Y_RNA.452-201ENST00000384202 108 ntBASIC0.02□□□□□ -2.41
PRPF39Q86UA1 Y_RNA.681-201ENST00000516445 113 ntBASIC0.02□□□□□ -2.41
PRPF39Q86UA1 AC138869.1-201ENST00000568623 124 ntBASIC0.02□□□□□ -2.41
PRPF39Q86UA1 AL359881.1-201ENST00000602916 267 ntBASIC0.02□□□□□ -2.41
PRPF39Q86UA1 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
PRPF39Q86UA1 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 SNORA2A-201ENST00000383885 135 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 Y_RNA.489-201ENST00000384410 101 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 SNORD77B-201ENST00000391112 67 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 RNU4-69P-201ENST00000410677 143 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 RNU6-848P-201ENST00000515948 107 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 RNU6-617P-201ENST00000516147 107 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 RNU6-473P-201ENST00000516164 107 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 RNU7-10P-201ENST00000607194 63 ntBASIC0.01□□□□□ -2.41
PRPF39Q86UA1 RNU6-429P-201ENST00000384582 108 ntBASIC0□□□□□ -2.41
PRPF39Q86UA1 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
PRPF39Q86UA1 MIR643-201ENST00000385267 97 ntBASIC0□□□□□ -2.41
PRPF39Q86UA1 RNU6-239P-201ENST00000390990 99 ntBASIC0□□□□□ -2.41
PRPF39Q86UA1 AC108059.2-201ENST00000434626 151 ntBASIC0□□□□□ -2.41
PRPF39Q86UA1 AC022559.1-201ENST00000520905 205 ntBASIC0□□□□□ -2.41
PRPF39Q86UA1 AC009779.6-201ENST00000603972 165 ntBASIC0□□□□□ -2.41
PRPF39Q86UA1 RNU1-29P-201ENST00000606574 126 ntBASIC0□□□□□ -2.41
PRPF39Q86UA1 RNY1P2-201ENST00000364820 117 ntBASIC-0.01□□□□□ -2.41
PRPF39Q86UA1 RNU6-574P-201ENST00000384265 107 ntBASIC-0.01□□□□□ -2.41
PRPF39Q86UA1 RNU6-127P-201ENST00000390897 107 ntBASIC-0.01□□□□□ -2.41
PRPF39Q86UA1 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.01□□□□□ -2.41
PRPF39Q86UA1 RNU7-123P-201ENST00000515911 60 ntBASIC-0.01□□□□□ -2.41
PRPF39Q86UA1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.01□□□□□ -2.41
PRPF39Q86UA1 AC067863.3-201ENST00000624172 122 ntBASIC-0.01□□□□□ -2.41
PRPF39Q86UA1 RNA5SP128-201ENST00000365305 116 ntBASIC-0.02□□□□□ -2.41
PRPF39Q86UA1 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.02□□□□□ -2.41
PRPF39Q86UA1 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.02□□□□□ -2.41
PRPF39Q86UA1 AC130289.1-201ENST00000577321 73 ntBASIC-0.02□□□□□ -2.41
PRPF39Q86UA1 MIR499B-201ENST00000636498 73 ntBASIC-0.02□□□□□ -2.41
PRPF39Q86UA1 AC244505.6-201ENST00000452829 130 ntBASIC-0.03□□□□□ -2.41
PRPF39Q86UA1 RNU7-104P-201ENST00000459398 79 ntBASIC-0.03□□□□□ -2.41
PRPF39Q86UA1 MIR4500-201ENST00000579472 76 ntBASIC-0.03□□□□□ -2.41
PRPF39Q86UA1 AC072026.1-201ENST00000605023 201 ntBASIC-0.03□□□□□ -2.41
PRPF39Q86UA1 MIR635-201ENST00000384830 98 ntBASIC-0.04□□□□□ -2.42
PRPF39Q86UA1 MIR548H2-201ENST00000408874 88 ntBASIC-0.04□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.04□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.04□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.04□□□□□ -2.42
PRPF39Q86UA1 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.04□□□□□ -2.42
PRPF39Q86UA1 MIR371B-201ENST00000638082 66 ntBASIC-0.04□□□□□ -2.42
PRPF39Q86UA1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.04□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 MIR593-201ENST00000384856 100 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 RNU7-48P-201ENST00000458875 63 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 RPL39P34-201ENST00000477141 156 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 RNU2-60P-201ENST00000517290 128 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 MIR3658-201ENST00000636291 56 ntBASIC-0.05□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.06□□□□□ -2.42
PRPF39Q86UA1 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.06□□□□□ -2.42
PRPF39Q86UA1 RNU4-84P-201ENST00000364200 139 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms