Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR644A-201ENST00000385262 94 ntBASIC0.44□□□□□ -2.34
NPHP3Q7Z494 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
NPHP3Q7Z494 RNU7-164P-201ENST00000459221 62 ntBASIC0.44□□□□□ -2.34
NPHP3Q7Z494 RNU5E-3P-201ENST00000515913 68 ntBASIC0.44□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.690-201ENST00000516603 95 ntBASIC0.44□□□□□ -2.34
NPHP3Q7Z494 MTND5P34-201ENST00000568888 325 ntBASIC0.44□□□□□ -2.34
NPHP3Q7Z494 RNA5SP517-201ENST00000364724 117 ntBASIC0.43□□□□□ -2.34
NPHP3Q7Z494 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.366-201ENST00000365540 102 ntBASIC0.43□□□□□ -2.34
NPHP3Q7Z494 RNU7-123P-201ENST00000515911 60 ntBASIC0.43□□□□□ -2.34
NPHP3Q7Z494 RNA5SP94-201ENST00000516917 108 ntBASIC0.43□□□□□ -2.34
NPHP3Q7Z494 AL359881.1-201ENST00000602916 267 ntBASIC0.43□□□□□ -2.34
NPHP3Q7Z494 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
NPHP3Q7Z494 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.42□□□□□ -2.34
NPHP3Q7Z494 MIR1270-201ENST00000459320 83 ntBASIC0.42□□□□□ -2.34
NPHP3Q7Z494 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
NPHP3Q7Z494 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
NPHP3Q7Z494 SNORD67.1-201ENST00000516618 108 ntBASIC0.42□□□□□ -2.34
NPHP3Q7Z494 AC108081.1-201ENST00000604358 221 ntBASIC0.42□□□□□ -2.34
NPHP3Q7Z494 AC090425.1-201ENST00000610007 140 ntBASIC0.42□□□□□ -2.34
NPHP3Q7Z494 MIR6086-201ENST00000638065 55 ntBASIC0.42□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.32-201ENST00000362589 110 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 RNU6-460P-201ENST00000391158 108 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 AL603914.1-201ENST00000401964 204 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
NPHP3Q7Z494 RNU7-197P-201ENST00000458836 62 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 RNU6-531P-201ENST00000516694 104 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 SNORA31.14-201ENST00000516728 116 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 AC105081.1-201ENST00000617727 106 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 uc_338.16-201ENST00000621804 95 ntBASIC0.41□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.8-201ENST00000362353 102 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 RNA5SP133-201ENST00000363368 119 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 SNORD116-18-201ENST00000383961 92 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 RNU6-804P-201ENST00000384286 107 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 RNU6-291P-201ENST00000384720 107 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 RNU6-394P-201ENST00000410735 107 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 SNORA25.12-201ENST00000516202 82 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 RNU7-137P-201ENST00000516788 62 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 RNU6-765P-201ENST00000516916 99 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 DEFB131E-201ENST00000532329 154 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 SNORA25.18-201ENST00000607153 114 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.778-201ENST00000620203 90 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 U6.109-201ENST00000636749 87 ntBASIC0.4□□□□□ -2.34
NPHP3Q7Z494 Y_RNA.150-201ENST00000363562 102 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.298-201ENST00000364960 107 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 RNU6-449P-201ENST00000383914 107 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.536-201ENST00000384621 113 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.567-201ENST00000384736 106 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
NPHP3Q7Z494 RNA5SP299-201ENST00000391203 116 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.697-201ENST00000516776 113 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 RNU6-182P-201ENST00000516970 105 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 AC022523.2-201ENST00000561045 150 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 MIR6759-201ENST00000638110 65 ntBASIC0.39□□□□□ -2.35
NPHP3Q7Z494 SNORA36.1-201ENST00000363424 132 ntBASIC0.38□□□□□ -2.35
NPHP3Q7Z494 RNU6-535P-201ENST00000384722 107 ntBASIC0.38□□□□□ -2.35
NPHP3Q7Z494 AC138749.4-201ENST00000563970 127 ntBASIC0.38□□□□□ -2.35
NPHP3Q7Z494 RNU6-1104P-201ENST00000384723 104 ntBASIC0.38□□□□□ -2.35
NPHP3Q7Z494 PCNPP3-201ENST00000393579 471 ntBASIC0.38□□□□□ -2.35
NPHP3Q7Z494 RNU6-469P-201ENST00000516253 101 ntBASIC0.38□□□□□ -2.35
NPHP3Q7Z494 RNY4P20-201ENST00000516678 93 ntBASIC0.38□□□□□ -2.35
NPHP3Q7Z494 AL137067.1-201ENST00000615933 120 ntBASIC0.38□□□□□ -2.35
NPHP3Q7Z494 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 RNA5SP245-201ENST00000364239 121 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 RNU6-915P-201ENST00000364943 103 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.398-201ENST00000383952 99 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 SNORA8.2-201ENST00000384372 139 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 MIR329-2-201ENST00000385029 84 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.580-201ENST00000391004 95 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 RNU4-69P-201ENST00000410677 143 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 SNORA40.8-201ENST00000411034 126 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 MIR3144-201ENST00000579460 79 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 FTX_2.1-201ENST00000618816 94 ntBASIC0.37□□□□□ -2.35
NPHP3Q7Z494 MIR103A1-201ENST00000362165 78 ntBASIC0.36□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.119-201ENST00000363301 96 ntBASIC0.36□□□□□ -2.35
NPHP3Q7Z494 SNORD114-10-201ENST00000363409 72 ntBASIC0.36□□□□□ -2.35
NPHP3Q7Z494 MIR513C-201ENST00000401352 84 ntBASIC0.36□□□□□ -2.35
NPHP3Q7Z494 RNU6-1194P-201ENST00000516208 104 ntBASIC0.36□□□□□ -2.35
NPHP3Q7Z494 IGKV1-22-201ENST00000524313 326 ntBASIC0.36□□□□□ -2.35
NPHP3Q7Z494 MIR3121-201ENST00000579680 77 ntBASIC0.36□□□□□ -2.35
NPHP3Q7Z494 RNU4-58P-201ENST00000363192 141 ntBASIC0.35□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.174-201ENST00000363781 105 ntBASIC0.35□□□□□ -2.35
NPHP3Q7Z494 Y_RNA.270-201ENST00000364693 104 ntBASIC0.35□□□□□ -2.35
NPHP3Q7Z494 RNU6-1321P-201ENST00000390905 107 ntBASIC0.35□□□□□ -2.35
NPHP3Q7Z494 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.35□□□□□ -2.35
NPHP3Q7Z494 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
NPHP3Q7Z494 SNORA63.5-201ENST00000363548 123 ntBASIC0.34□□□□□ -2.36
NPHP3Q7Z494 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
NPHP3Q7Z494 RNU6-886P-201ENST00000384319 105 ntBASIC0.34□□□□□ -2.36
NPHP3Q7Z494 MTND5P41-201ENST00000517498 206 ntBASIC0.34□□□□□ -2.36
NPHP3Q7Z494 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.34□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.299-201ENST00000364973 94 ntBASIC0.33□□□□□ -2.36
NPHP3Q7Z494 MIR206-201ENST00000384872 86 ntBASIC0.33□□□□□ -2.36
NPHP3Q7Z494 SNORD71-201ENST00000411292 86 ntBASIC0.33□□□□□ -2.36
NPHP3Q7Z494 SUMO1P3-201ENST00000439961 304 ntBASIC0.33□□□□□ -2.36
NPHP3Q7Z494 RNA5SP272-201ENST00000516095 111 ntBASIC0.33□□□□□ -2.36
NPHP3Q7Z494 RNA5SP268-201ENST00000516828 124 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms