Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-1321P-201ENST00000390905 107 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 MIR1263-201ENST00000408324 86 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNA5SP136-201ENST00000410906 107 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-971P-201ENST00000516920 106 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 MTND5P34-201ENST00000568888 325 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 RNU4-45P-201ENST00000365469 141 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-531P-201ENST00000516694 104 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-1234P-201ENST00000516877 103 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 Y_RNA.773-201ENST00000607168 90 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 uc_338.16-201ENST00000621804 95 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 SNORD115-19-201ENST00000363098 82 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 SNORD115-18-201ENST00000363293 82 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 SNORD115-17-201ENST00000364612 82 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 SNORD50.2-201ENST00000365465 70 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-291P-201ENST00000384720 107 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 SNORA36.2-201ENST00000384004 127 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.528-201ENST00000384575 108 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 SNORD77B-201ENST00000391112 67 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 RNU7-6P-201ENST00000516845 62 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 RNY1P2-201ENST00000364820 117 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.448-201ENST00000384185 108 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.525-201ENST00000384570 113 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.630-201ENST00000411370 108 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-772P-201ENST00000516042 105 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 MIR3163-201ENST00000581592 73 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.218-201ENST00000364218 104 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 RNU7-107P-201ENST00000459121 61 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-1211P-201ENST00000459179 105 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 RNU7-2P-201ENST00000516096 62 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 SNORA31.14-201ENST00000516728 116 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-704P-201ENST00000364162 103 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.213-201ENST00000364178 111 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 RNA5SP480-201ENST00000516840 109 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 MIR3678-201ENST00000578455 94 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 AC025166.1-201ENST00000612411 163 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 RNU4-58P-201ENST00000363192 141 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 SNORD115-35-201ENST00000365122 82 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 MIR644A-201ENST00000385262 94 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 RNU7-48P-201ENST00000458875 63 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 RNU4-54P-201ENST00000516428 129 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-1061P-201ENST00000516530 99 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 MIR1255B1-201ENST00000636325 63 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 RNA5SP117-201ENST00000365294 118 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 MIR539-201ENST00000365690 78 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-945P-201ENST00000383947 107 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 RNA5SP121-201ENST00000516537 101 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 DEFB131E-201ENST00000532329 154 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 MTND5P18-201ENST00000445624 1801 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 RNA5SP245-201ENST00000364239 121 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 RNU6-535P-201ENST00000384722 107 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 MIR548D2-201ENST00000384955 97 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 MIR7-2-201ENST00000384970 110 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 RNA5SP94-201ENST00000516917 108 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 MIR376B-201ENST00000614515 100 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.127-201ENST00000363386 109 ntBASIC0.7□□□□□ -2.3
PPP4R4Q6NUP7 SNORD114-26-201ENST00000363543 72 ntBASIC0.7□□□□□ -2.3
PPP4R4Q6NUP7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PPP4R4Q6NUP7 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
PPP4R4Q6NUP7 SNORA63.5-201ENST00000363548 123 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 SNORD18A-201ENST00000363753 72 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.328-201ENST00000365208 113 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.344-201ENST00000365381 112 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 RNU6-429P-201ENST00000384582 108 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 RN7SKP12-201ENST00000516275 143 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.98-201ENST00000363109 102 ntBASIC0.68□□□□□ -2.3
PPP4R4Q6NUP7 SNORA36.1-201ENST00000363424 132 ntBASIC0.68□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.68□□□□□ -2.3
PPP4R4Q6NUP7 RNA5SP517-201ENST00000364724 117 ntBASIC0.68□□□□□ -2.3
PPP4R4Q6NUP7 RNU6-80P-201ENST00000384195 107 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 257.8 ms