Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF20Q5VTR2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNF20Q5VTR2 Y_RNA.508-201ENST00000384502 114 ntBASIC2.34□□□□□ -2.03
RNF20Q5VTR2 AL356379.1-201ENST00000414105 126 ntBASIC2.34□□□□□ -2.03
RNF20Q5VTR2 AL450471.1-201ENST00000447509 127 ntBASIC2.34□□□□□ -2.03
RNF20Q5VTR2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
RNF20Q5VTR2 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.04
RNF20Q5VTR2 SUMO2P12-201ENST00000405924 140 ntBASIC2.33□□□□□ -2.04
RNF20Q5VTR2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF20Q5VTR2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF20Q5VTR2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.33□□□□□ -2.04
RNF20Q5VTR2 AC008163.1-202ENST00000636004 2889 ntBASIC2.33□□□□□ -2.04
RNF20Q5VTR2 SNORD36A-201ENST00000362874 73 ntBASIC2.32□□□□□ -2.04
RNF20Q5VTR2 RNU6-403P-201ENST00000363163 104 ntBASIC2.32□□□□□ -2.04
RNF20Q5VTR2 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
RNF20Q5VTR2 RNU6-129P-201ENST00000391022 107 ntBASIC2.32□□□□□ -2.04
RNF20Q5VTR2 snoU13.9-201ENST00000458927 103 ntBASIC2.32□□□□□ -2.04
RNF20Q5VTR2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.32□□□□□ -2.04
RNF20Q5VTR2 MIR4536-1-201ENST00000583537 88 ntBASIC2.32□□□□□ -2.04
RNF20Q5VTR2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RNF20Q5VTR2 RNU6-478P-201ENST00000363904 110 ntBASIC2.31□□□□□ -2.04
RNF20Q5VTR2 RNU6-243P-201ENST00000391140 107 ntBASIC2.31□□□□□ -2.04
RNF20Q5VTR2 RNU6-1254P-201ENST00000391266 104 ntBASIC2.31□□□□□ -2.04
RNF20Q5VTR2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF20Q5VTR2 RNU7-106P-201ENST00000459514 67 ntBASIC2.31□□□□□ -2.04
RNF20Q5VTR2 RNU11-2P-201ENST00000516898 142 ntBASIC2.31□□□□□ -2.04
RNF20Q5VTR2 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
RNF20Q5VTR2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF20Q5VTR2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
RNF20Q5VTR2 Y_RNA.588-201ENST00000391254 102 ntBASIC2.3□□□□□ -2.04
RNF20Q5VTR2 AC103810.8-201ENST00000607347 118 ntBASIC2.3□□□□□ -2.04
RNF20Q5VTR2 MIR377-201ENST00000362145 69 ntBASIC2.29□□□□□ -2.04
RNF20Q5VTR2 U8.2-201ENST00000363156 134 ntBASIC2.29□□□□□ -2.04
RNF20Q5VTR2 RNU4-58P-201ENST00000363192 141 ntBASIC2.29□□□□□ -2.04
RNF20Q5VTR2 SNORD1A-201ENST00000364968 72 ntBASIC2.29□□□□□ -2.04
RNF20Q5VTR2 RNU1-36P-201ENST00000365130 165 ntBASIC2.29□□□□□ -2.04
RNF20Q5VTR2 RNU6-53P-201ENST00000365367 106 ntBASIC2.29□□□□□ -2.04
RNF20Q5VTR2 HMGN2P23-201ENST00000456759 269 ntBASIC2.29□□□□□ -2.04
RNF20Q5VTR2 MIR4796-201ENST00000580742 81 ntBASIC2.29□□□□□ -2.04
RNF20Q5VTR2 RNA5SP292-201ENST00000390974 118 ntBASIC2.28□□□□□ -2.04
RNF20Q5VTR2 AC073261.1-201ENST00000429409 121 ntBASIC2.28□□□□□ -2.04
RNF20Q5VTR2 snoU13.21-201ENST00000459368 105 ntBASIC2.28□□□□□ -2.04
RNF20Q5VTR2 AC079140.2-201ENST00000506193 142 ntBASIC2.28□□□□□ -2.04
RNF20Q5VTR2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF20Q5VTR2 RNU6-315P-201ENST00000362666 107 ntBASIC2.27□□□□□ -2.05
RNF20Q5VTR2 RNU6-811P-201ENST00000384069 107 ntBASIC2.27□□□□□ -2.05
RNF20Q5VTR2 MIR18B-201ENST00000454574 71 ntBASIC2.27□□□□□ -2.05
RNF20Q5VTR2 AC023934.1-201ENST00000574529 2389 ntBASIC2.27□□□□□ -2.05
RNF20Q5VTR2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF20Q5VTR2 MIR302D-201ENST00000362275 68 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 RNU6-624P-201ENST00000363411 107 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 RNU6-1229P-201ENST00000364295 107 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 RNU6-580P-201ENST00000365159 107 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 Y_RNA.565-201ENST00000384719 101 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 SNORD63B-201ENST00000411005 70 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 RNU1-41P-201ENST00000516161 162 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 RNU1-48P-201ENST00000516400 162 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 MIR3937-201ENST00000580135 106 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 AC145423.2-201ENST00000610631 239 ntBASIC2.26□□□□□ -2.05
RNF20Q5VTR2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
RNF20Q5VTR2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RNF20Q5VTR2 Y_RNA.283-201ENST00000364798 112 ntBASIC2.25□□□□□ -2.05
RNF20Q5VTR2 MIR30A-201ENST00000385092 71 ntBASIC2.25□□□□□ -2.05
RNF20Q5VTR2 U8.13-201ENST00000390842 128 ntBASIC2.25□□□□□ -2.05
RNF20Q5VTR2 SNORA18.5-201ENST00000516616 101 ntBASIC2.25□□□□□ -2.05
RNF20Q5VTR2 AC013244.2-201ENST00000603396 103 ntBASIC2.25□□□□□ -2.05
RNF20Q5VTR2 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.25□□□□□ -2.05
RNF20Q5VTR2 Y_RNA.330-201ENST00000365230 109 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 RNU6-132P-201ENST00000383863 107 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 SNORA70B-201ENST00000384210 135 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RNF20Q5VTR2 RNU6-466P-201ENST00000391224 103 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 HMGN2P19-201ENST00000425149 265 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 RPL23AP42-201ENST00000471152 471 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 RNU6-75P-201ENST00000515944 104 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 SNORA44.1-201ENST00000517031 108 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.24□□□□□ -2.05
RNF20Q5VTR2 AC012493.3-201ENST00000604494 112 ntBASIC2.24□□□□□ -2.05
RNF20Q5VTR2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF20Q5VTR2 MIR101-2-201ENST00000362195 79 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 RNU6-1094P-201ENST00000362416 104 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 RNU6-957P-201ENST00000363652 99 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 SNORD100-201ENST00000408573 76 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 SNORD83.1-201ENST00000411362 77 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 AC015818.7-201ENST00000428754 109 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 RNA5SP233-201ENST00000459153 113 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 RNU7-185P-201ENST00000459215 60 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 RNU6-165P-201ENST00000517170 99 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 MIR3664-201ENST00000579074 99 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.23□□□□□ -2.05
RNF20Q5VTR2 U7.4-201ENST00000614961 63 ntBASIC2.23□□□□□ -2.05
RNF20Q5VTR2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RNF20Q5VTR2 SNORA63.2-201ENST00000362603 126 ntBASIC2.22□□□□□ -2.05
RNF20Q5VTR2 RNU6-161P-201ENST00000363051 106 ntBASIC2.22□□□□□ -2.05
RNF20Q5VTR2 RNU6-1065P-201ENST00000384513 106 ntBASIC2.22□□□□□ -2.05
RNF20Q5VTR2 RN7SL429P-201ENST00000479090 223 ntBASIC2.22□□□□□ -2.05
RNF20Q5VTR2 RN7SL489P-201ENST00000486185 223 ntBASIC2.22□□□□□ -2.05
RNF20Q5VTR2 RN7SL327P-201ENST00000488659 223 ntBASIC2.22□□□□□ -2.05
RNF20Q5VTR2 RNU6-1108P-201ENST00000516308 104 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms