Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC025627.3-201ENST00000582078 182 ntBASIC1.11□□□□□ -2.23
KHDC1Q4VXA5 AL035470.1-201ENST00000622571 220 ntBASIC1.11□□□□□ -2.23
KHDC1Q4VXA5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.11□□□□□ -2.23
KHDC1Q4VXA5 SNORA63.5-201ENST00000363548 123 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 Y_RNA.448-201ENST00000384185 108 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 MIR499A-201ENST00000384903 122 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 RNU7-56P-201ENST00000458744 62 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 RNU7-48P-201ENST00000458875 63 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 MIR6129-201ENST00000616087 109 ntBASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KHDC1Q4VXA5 Y_RNA.49-201ENST00000362714 112 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 Y_RNA.328-201ENST00000365208 113 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 RNU6-409P-201ENST00000384114 104 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 RNU6-364P-201ENST00000384387 107 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 RNU6-429P-201ENST00000384582 108 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 RNU6-816P-201ENST00000390914 107 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 RNU6-1268P-201ENST00000391214 107 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 RNU6-1239P-201ENST00000391310 107 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 AC138749.4-201ENST00000563970 127 ntBASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
KHDC1Q4VXA5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 RNU6-403P-201ENST00000363163 104 ntBASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 RNU6-865P-201ENST00000364772 107 ntBASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 MIR520F-201ENST00000384824 87 ntBASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 RNU6-1307P-201ENST00000391012 103 ntBASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 PDCD5P2-201ENST00000507570 312 ntBASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 RNU6-1018P-201ENST00000516577 106 ntBASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 AC068339.1-201ENST00000526965 141 ntBASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
KHDC1Q4VXA5 RNA5SP133-201ENST00000363368 119 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 Y_RNA.155-201ENST00000363632 101 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 SNORD105-201ENST00000386910 85 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 RNU1-119P-201ENST00000391122 165 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 SNORA7.5-201ENST00000410672 110 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 RNU6-733P-201ENST00000410759 104 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 RNU6-589P-201ENST00000516485 107 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 MIR6082-201ENST00000613604 109 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 MIR8066-201ENST00000617280 78 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 U6.109-201ENST00000636749 87 ntBASIC1.07□□□□□ -2.24
KHDC1Q4VXA5 Y_RNA.42-201ENST00000362660 108 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 U8.6-201ENST00000364939 135 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 RNU7-102P-201ENST00000458948 62 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 RNU6-1194P-201ENST00000516208 104 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 RNU6-765P-201ENST00000516916 99 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 MIR5009-201ENST00000578736 100 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 AP001362.1-201ENST00000625165 124 ntBASIC1.06□□□□□ -2.24
KHDC1Q4VXA5 MIR96-201ENST00000362288 78 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 RNU6-1313P-201ENST00000362622 102 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 RNU4-58P-201ENST00000363192 141 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 Y_RNA.119-201ENST00000363301 96 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 SNORD114-27-201ENST00000363766 70 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 RNU6-1107P-201ENST00000364817 104 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 RNU6-1325P-201ENST00000364905 105 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 Y_RNA.323-201ENST00000365157 109 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 RNU6-679P-201ENST00000391003 106 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 SNORA25.16-201ENST00000516741 121 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 MIR376B-201ENST00000614515 100 ntBASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
KHDC1Q4VXA5 SNORA72.6-201ENST00000384520 129 ntBASIC1.04□□□□□ -2.24
KHDC1Q4VXA5 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
KHDC1Q4VXA5 Y_RNA.709-201ENST00000516952 92 ntBASIC1.04□□□□□ -2.24
KHDC1Q4VXA5 DEFB131E-201ENST00000532329 154 ntBASIC1.04□□□□□ -2.24
KHDC1Q4VXA5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
KHDC1Q4VXA5 AL512310.12-203ENST00000640543 90 ntBASIC1.04□□□□□ -2.24
KHDC1Q4VXA5 Y_RNA.360-201ENST00000365512 102 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 MIR34C-201ENST00000384831 77 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 MIR605-201ENST00000385078 83 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 MIR520H-201ENST00000385126 88 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 AL353813.1-201ENST00000440700 253 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 RNU6-531P-201ENST00000516694 104 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 RNA5SP102-201ENST00000516865 106 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 MIR6767-201ENST00000637302 66 ntBASIC1.03□□□□□ -2.24
KHDC1Q4VXA5 RNU6-1335P-201ENST00000365426 107 ntBASIC1.02□□□□□ -2.25
KHDC1Q4VXA5 RNU6-1014P-201ENST00000383940 103 ntBASIC1.02□□□□□ -2.25
KHDC1Q4VXA5 MIR1276-201ENST00000408707 83 ntBASIC1.02□□□□□ -2.25
KHDC1Q4VXA5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.02□□□□□ -2.25
KHDC1Q4VXA5 AC090897.1-201ENST00000580909 226 ntBASIC1.02□□□□□ -2.25
KHDC1Q4VXA5 AC008608.1-201ENST00000603910 127 ntBASIC1.02□□□□□ -2.25
KHDC1Q4VXA5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.01□□□□□ -2.25
KHDC1Q4VXA5 RNU6-215P-201ENST00000365169 102 ntBASIC1.01□□□□□ -2.25
KHDC1Q4VXA5 SNORD20-201ENST00000384550 80 ntBASIC1.01□□□□□ -2.25
KHDC1Q4VXA5 AP003327.1-201ENST00000529684 127 ntBASIC1.01□□□□□ -2.25
KHDC1Q4VXA5 MIR4500-201ENST00000579472 76 ntBASIC1.01□□□□□ -2.25
KHDC1Q4VXA5 AC013244.2-201ENST00000603396 103 ntBASIC1.01□□□□□ -2.25
KHDC1Q4VXA5 MIR6504-201ENST00000613520 61 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 237.4 ms