Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 MIR4491-201ENST00000581087 68 ntBASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 MIR4804-201ENST00000581683 73 ntBASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 AC025627.3-201ENST00000582078 182 ntBASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-1290P-201ENST00000362957 109 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 RNU4-67P-201ENST00000364569 141 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-1321P-201ENST00000390905 107 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 MIR938-201ENST00000401216 83 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 RNU7-56P-201ENST00000458744 62 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-1018P-201ENST00000516577 106 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-521P-201ENST00000516663 105 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 SNORD92-201ENST00000585078 85 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 MIR1255B1-201ENST00000636325 63 ntBASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.49-201ENST00000362714 112 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 RNU4-83P-201ENST00000410863 133 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 RNU7-48P-201ENST00000458875 63 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 snoU13.18-201ENST00000459483 104 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 RNA5SP255-201ENST00000516370 107 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 RNU7-156P-201ENST00000517214 74 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.35-201ENST00000362601 101 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.328-201ENST00000365208 113 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-409P-201ENST00000384114 104 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.448-201ENST00000384185 108 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.549-201ENST00000384657 102 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-816P-201ENST00000390914 107 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 SNORD89-201ENST00000390981 114 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-1268P-201ENST00000391214 107 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-1239P-201ENST00000391310 107 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-765P-201ENST00000516916 99 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 AC068339.1-201ENST00000526965 141 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 AC105081.1-201ENST00000617727 106 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 AL035470.1-201ENST00000622571 220 ntBASIC1.02□□□□□ -2.25
PTCHD3Q3KNS1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 SNORA63.5-201ENST00000363548 123 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 RNU1-93P-201ENST00000364704 169 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-865P-201ENST00000364772 107 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.323-201ENST00000365157 109 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-364P-201ENST00000384387 107 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-589P-201ENST00000516485 107 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 AC138749.4-201ENST00000563970 127 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 AL078603.1-201ENST00000603824 313 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 MIR6082-201ENST00000613604 109 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 MIR8066-201ENST00000617280 78 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 AP001362.1-201ENST00000625165 124 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
PTCHD3Q3KNS1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-429P-201ENST00000384582 108 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 SNORD105-201ENST00000386910 85 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 RNU1-119P-201ENST00000391122 165 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-733P-201ENST00000410759 104 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 AC015818.7-201ENST00000428754 109 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 AC087499.7-201ENST00000441958 109 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 PDCD5P2-201ENST00000507570 312 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 MIR5009-201ENST00000578736 100 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 MIR6129-201ENST00000616087 109 ntBASIC1□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-403P-201ENST00000363163 104 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 RNU4-58P-201ENST00000363192 141 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.155-201ENST00000363632 101 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 MIR520F-201ENST00000384824 87 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 RPS29P1-201ENST00000465274 159 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-1313P-201ENST00000362622 102 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 RNA5SP133-201ENST00000363368 119 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-1107P-201ENST00000364817 104 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-1325P-201ENST00000364905 105 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 U8.6-201ENST00000364939 135 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-679P-201ENST00000391003 106 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-1307P-201ENST00000391012 103 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 SNORA7.5-201ENST00000410672 110 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.709-201ENST00000516952 92 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 MIR7111-201ENST00000619751 72 ntBASIC0.98□□□□□ -2.25
PTCHD3Q3KNS1 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 Y_RNA.360-201ENST00000365512 102 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 RNU6-42P-201ENST00000384165 107 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 RNU7-102P-201ENST00000458948 62 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 RNA5SP220-201ENST00000516298 104 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 AP003327.1-201ENST00000529684 127 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 AC090897.1-201ENST00000580909 226 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 MIR376B-201ENST00000614515 100 ntBASIC0.97□□□□□ -2.25
PTCHD3Q3KNS1 MIR6734-201ENST00000621166 68 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms