Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.34
SF3A2Q15428 RNU4-67P-201ENST00000364569 141 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RNY1P13-201ENST00000365030 105 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 Y_RNA.343-201ENST00000365354 112 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
SF3A2Q15428 RNU6-1062P-201ENST00000383908 107 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RNU6-949P-201ENST00000384040 107 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 SNORA32-201ENST00000384072 121 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 Y_RNA.568-201ENST00000384742 113 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 MIR125B2-201ENST00000385128 89 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 U8.15-201ENST00000390947 134 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 MIR938-201ENST00000401216 83 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 MIR1257-201ENST00000408490 117 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 SNORD93-201ENST00000408813 74 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RNU6-1086P-201ENST00000410930 100 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RPL39P25-201ENST00000449384 154 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RNU7-56P-201ENST00000458744 62 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RNU7-79P-201ENST00000516082 62 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RNY4P20-201ENST00000516678 93 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 IGKV1-22-201ENST00000524313 326 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 AP003327.1-201ENST00000529684 127 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 MIR548AE2-201ENST00000583456 67 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 U7.2-201ENST00000607576 63 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 AC067863.3-201ENST00000624172 122 ntBASIC0.4□□□□□ -2.35
SF3A2Q15428 RNU6-774P-201ENST00000363238 107 ntBASIC0.39□□□□□ -2.35
SF3A2Q15428 RNU6-364P-201ENST00000384387 107 ntBASIC0.39□□□□□ -2.35
SF3A2Q15428 MIR520H-201ENST00000385126 88 ntBASIC0.39□□□□□ -2.35
SF3A2Q15428 RNU6-257P-201ENST00000410238 98 ntBASIC0.39□□□□□ -2.35
SF3A2Q15428 MTND4LP9-201ENST00000427694 174 ntBASIC0.39□□□□□ -2.35
SF3A2Q15428 RNU7-35P-201ENST00000517174 62 ntBASIC0.39□□□□□ -2.35
SF3A2Q15428 RNU7-156P-201ENST00000517214 74 ntBASIC0.39□□□□□ -2.35
SF3A2Q15428 AC022523.2-201ENST00000561045 150 ntBASIC0.39□□□□□ -2.35
SF3A2Q15428 RNU6-647P-201ENST00000364243 107 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 RNU6-1104P-201ENST00000384723 104 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 SNORA40-201ENST00000388090 126 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 RNU4-69P-201ENST00000410677 143 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 RNU4-83P-201ENST00000410863 133 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 AC096949.1-201ENST00000412047 152 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
SF3A2Q15428 AL158147.1-201ENST00000443970 75 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.38□□□□□ -2.35
SF3A2Q15428 RNU7-102P-201ENST00000458948 62 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 MIR1270-201ENST00000459320 83 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 RN7SKP19-201ENST00000516016 252 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 MIR3133-201ENST00000583157 78 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 SNORD92-201ENST00000585078 85 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 AC008608.1-201ENST00000603910 127 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 TUG1_4.1-201ENST00000619464 181 ntBASIC0.38□□□□□ -2.35
SF3A2Q15428 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.38□□□□□ -2.35
SF3A2Q15428 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-235P-201ENST00000362644 107 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-403P-201ENST00000363163 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 Y_RNA.299-201ENST00000364973 94 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 MIR573-201ENST00000384964 99 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 Y_RNA.588-201ENST00000391254 102 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-447P-201ENST00000410293 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-1118P-201ENST00000410382 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-1076P-201ENST00000410397 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-355P-201ENST00000410427 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-791P-201ENST00000410467 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-705P-201ENST00000410601 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-1100P-201ENST00000410691 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-860P-201ENST00000410860 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-1217P-201ENST00000411276 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 RNU6-785P-201ENST00000411324 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 SNORD67.1-201ENST00000516618 108 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 Y_RNA.703-201ENST00000516846 111 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 MIR4491-201ENST00000581087 68 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 U6.90-201ENST00000614007 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 MIR8066-201ENST00000617280 78 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 U6.70-201ENST00000620287 104 ntBASIC0.37□□□□□ -2.35
SF3A2Q15428 Y_RNA.13-201ENST00000362403 112 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 RNU6-746P-201ENST00000384112 109 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 Y_RNA.586-201ENST00000391146 98 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 MIR1263-201ENST00000408324 86 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 Y_RNA.617-201ENST00000410920 90 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 RNU6-1211P-201ENST00000459179 105 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 RNU6-781P-201ENST00000516377 101 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 RNU7-137P-201ENST00000516788 62 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 AL359881.1-201ENST00000602916 267 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 MIR6082-201ENST00000613604 109 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 MIR6759-201ENST00000638110 65 ntBASIC0.36□□□□□ -2.35
SF3A2Q15428 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
SF3A2Q15428 Y_RNA.42-201ENST00000362660 108 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 RNU6-187P-201ENST00000384139 106 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 SNORA72.6-201ENST00000384520 129 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 MT-TI-201ENST00000387365 69 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 SNORD77B-201ENST00000391112 67 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 RNA5SP136-201ENST00000410906 107 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 RNU7-6P-201ENST00000516845 62 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 RNU6-971P-201ENST00000516920 106 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 MIR3612-201ENST00000579753 87 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 AC090897.1-201ENST00000580909 226 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
SF3A2Q15428 AC105081.1-201ENST00000617727 106 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms