Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC002350.1-201ENST00000490759 375 ntBASIC0.88□□□□□ -2.27
SUMO3P55854 DEFB131E-201ENST00000532329 154 ntBASIC0.88□□□□□ -2.27
SUMO3P55854 MIR4679-2-201ENST00000578358 77 ntBASIC0.88□□□□□ -2.27
SUMO3P55854 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
SUMO3P55854 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.88□□□□□ -2.27
SUMO3P55854 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
SUMO3P55854 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SUMO3P55854 Y_RNA.119-201ENST00000363301 96 ntBASIC0.87□□□□□ -2.27
SUMO3P55854 RNU6-22P-201ENST00000384355 107 ntBASIC0.87□□□□□ -2.27
SUMO3P55854 RNU6-110P-201ENST00000384508 104 ntBASIC0.87□□□□□ -2.27
SUMO3P55854 MIR605-201ENST00000385078 83 ntBASIC0.87□□□□□ -2.27
SUMO3P55854 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.87□□□□□ -2.27
SUMO3P55854 RNU4-61P-201ENST00000411243 107 ntBASIC0.87□□□□□ -2.27
SUMO3P55854 RNU6-531P-201ENST00000516694 104 ntBASIC0.87□□□□□ -2.27
SUMO3P55854 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.87□□□□□ -2.27
SUMO3P55854 RNU6-363P-201ENST00000362895 105 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 RNU6-865P-201ENST00000364772 107 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 Y_RNA.344-201ENST00000365381 112 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 RNU4-45P-201ENST00000365469 141 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 RNU6-429P-201ENST00000384582 108 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 MIR548A3-201ENST00000385297 97 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 RPL39P34-201ENST00000477141 156 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 RNU6-521P-201ENST00000516663 105 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 MIR3612-201ENST00000579753 87 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 AL365222.1-201ENST00000614661 98 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 AP001362.1-201ENST00000625165 124 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 MIR1255B1-201ENST00000636325 63 ntBASIC0.86□□□□□ -2.27
SUMO3P55854 Y_RNA.261-201ENST00000364631 102 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 RNA5SP117-201ENST00000365294 118 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 Y_RNA.353-201ENST00000365440 108 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 Y_RNA.362-201ENST00000365518 110 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 SNORD33.1-201ENST00000516213 88 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 AC007012.1-201ENST00000567192 175 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 AL670379.3-201ENST00000605040 251 ntBASIC0.85□□□□□ -2.27
SUMO3P55854 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SUMO3P55854 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SUMO3P55854 RNU4-67P-201ENST00000364569 141 ntBASIC0.84□□□□□ -2.27
SUMO3P55854 Y_RNA.507-201ENST00000384500 99 ntBASIC0.84□□□□□ -2.27
SUMO3P55854 RNU6-1168P-201ENST00000390831 104 ntBASIC0.84□□□□□ -2.27
SUMO3P55854 RNU6-1307P-201ENST00000391012 103 ntBASIC0.84□□□□□ -2.27
SUMO3P55854 RNU6-406P-201ENST00000516470 107 ntBASIC0.84□□□□□ -2.27
SUMO3P55854 Y_RNA.697-201ENST00000516776 113 ntBASIC0.84□□□□□ -2.27
SUMO3P55854 Y_RNA.536-201ENST00000384621 113 ntBASIC0.83□□□□□ -2.28
SUMO3P55854 MIR1912-201ENST00000410389 80 ntBASIC0.83□□□□□ -2.28
SUMO3P55854 RNU6-479P-201ENST00000516348 105 ntBASIC0.83□□□□□ -2.28
SUMO3P55854 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.83□□□□□ -2.28
SUMO3P55854 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
SUMO3P55854 MIR376B-201ENST00000614515 100 ntBASIC0.83□□□□□ -2.28
SUMO3P55854 MIR18A-201ENST00000362310 71 ntBASIC0.82□□□□□ -2.28
SUMO3P55854 Y_RNA.85-201ENST00000363014 111 ntBASIC0.82□□□□□ -2.28
SUMO3P55854 Y_RNA.174-201ENST00000363781 105 ntBASIC0.82□□□□□ -2.28
SUMO3P55854 MIR548A1-201ENST00000385041 97 ntBASIC0.82□□□□□ -2.28
SUMO3P55854 RNA5SP222-201ENST00000411039 105 ntBASIC0.82□□□□□ -2.28
SUMO3P55854 RNU6-1018P-201ENST00000516577 106 ntBASIC0.82□□□□□ -2.28
SUMO3P55854 AL162726.3-218ENST00000636401 95 ntBASIC0.82□□□□□ -2.28
SUMO3P55854 MIR101-2-201ENST00000362195 79 ntBASIC0.81□□□□□ -2.28
SUMO3P55854 RNA5SP205-201ENST00000364653 136 ntBASIC0.81□□□□□ -2.28
SUMO3P55854 RNU6-409P-201ENST00000384114 104 ntBASIC0.81□□□□□ -2.28
SUMO3P55854 MTND5P34-201ENST00000568888 325 ntBASIC0.81□□□□□ -2.28
SUMO3P55854 MIR4500-201ENST00000579472 76 ntBASIC0.81□□□□□ -2.28
SUMO3P55854 Y_RNA.309-201ENST00000365046 111 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 Y_RNA.360-201ENST00000365512 102 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 RNU6-291P-201ENST00000384720 107 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 RNU6-535P-201ENST00000384722 107 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 RNU6-816P-201ENST00000390914 107 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 RNU6-1154P-201ENST00000391001 104 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 RNU6-1268P-201ENST00000391214 107 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 RNU6-1239P-201ENST00000391310 107 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 SNORA7.5-201ENST00000410672 110 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 AL606753.1-201ENST00000427435 87 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 RNU6-313P-201ENST00000516317 112 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 RNA5SP102-201ENST00000516865 106 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 uc_338.16-201ENST00000621804 95 ntBASIC0.8□□□□□ -2.28
SUMO3P55854 Y_RNA.56-201ENST00000362798 112 ntBASIC0.79□□□□□ -2.28
SUMO3P55854 Y_RNA.155-201ENST00000363632 101 ntBASIC0.79□□□□□ -2.28
SUMO3P55854 MIR34C-201ENST00000384831 77 ntBASIC0.79□□□□□ -2.28
SUMO3P55854 RNU6-733P-201ENST00000410759 104 ntBASIC0.79□□□□□ -2.28
SUMO3P55854 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
SUMO3P55854 RNU6-1313P-201ENST00000362622 102 ntBASIC0.78□□□□□ -2.28
SUMO3P55854 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
SUMO3P55854 SNORD38.2-201ENST00000384470 69 ntBASIC0.78□□□□□ -2.28
SUMO3P55854 AC004941.2-201ENST00000427009 228 ntBASIC0.78□□□□□ -2.28
SUMO3P55854 MIR548H5-201ENST00000580314 60 ntBASIC0.78□□□□□ -2.28
SUMO3P55854 RNU7-10P-201ENST00000607194 63 ntBASIC0.78□□□□□ -2.28
SUMO3P55854 AL512310.12-203ENST00000640543 90 ntBASIC0.78□□□□□ -2.28
SUMO3P55854 RNU6-834P-201ENST00000362367 110 ntBASIC0.77□□□□□ -2.29
SUMO3P55854 RNU6-679P-201ENST00000391003 106 ntBASIC0.77□□□□□ -2.29
SUMO3P55854 MIR548I2-201ENST00000408348 149 ntBASIC0.77□□□□□ -2.29
SUMO3P55854 SNORA31.14-201ENST00000516728 116 ntBASIC0.77□□□□□ -2.29
SUMO3P55854 AL035470.1-201ENST00000622571 220 ntBASIC0.77□□□□□ -2.29
SUMO3P55854 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
SUMO3P55854 SNORA63.5-201ENST00000363548 123 ntBASIC0.76□□□□□ -2.29
SUMO3P55854 SNORA36.2-201ENST00000384004 127 ntBASIC0.76□□□□□ -2.29
SUMO3P55854 SNORD116-21-201ENST00000384507 92 ntBASIC0.76□□□□□ -2.29
SUMO3P55854 RNU6-880P-201ENST00000384526 107 ntBASIC0.76□□□□□ -2.29
SUMO3P55854 Y_RNA.549-201ENST00000384657 102 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms