Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-850P-201ENST00000516934 103 ntBASIC2.12□□□□□ -2.07
USP11P51784 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USP11P51784 MIR8066-201ENST00000617280 78 ntBASIC2.12□□□□□ -2.07
USP11P51784 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
USP11P51784 SNORA26.9-201ENST00000391322 122 ntBASIC2.11□□□□□ -2.07
USP11P51784 SUMO2P12-201ENST00000405924 140 ntBASIC2.11□□□□□ -2.07
USP11P51784 RNA5SP458-201ENST00000516188 119 ntBASIC2.11□□□□□ -2.07
USP11P51784 SNORA25.13-201ENST00000516395 103 ntBASIC2.11□□□□□ -2.07
USP11P51784 MIR4299-201ENST00000577899 72 ntBASIC2.11□□□□□ -2.07
USP11P51784 AP000753.3-201ENST00000604083 169 ntBASIC2.11□□□□□ -2.07
USP11P51784 uc_338.6-201ENST00000613544 171 ntBASIC2.11□□□□□ -2.07
USP11P51784 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP11P51784 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP11P51784 RNU6-478P-201ENST00000363904 110 ntBASIC2.1□□□□□ -2.07
USP11P51784 BX276092.1-201ENST00000427368 251 ntBASIC2.1□□□□□ -2.07
USP11P51784 SNORA77B-201ENST00000578179 125 ntBASIC2.1□□□□□ -2.07
USP11P51784 U6.109-201ENST00000636749 87 ntBASIC2.1□□□□□ -2.07
USP11P51784 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
USP11P51784 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
USP11P51784 Y_RNA.57-201ENST00000362806 113 ntBASIC2.09□□□□□ -2.07
USP11P51784 Y_RNA.119-201ENST00000363301 96 ntBASIC2.09□□□□□ -2.07
USP11P51784 SNORD115-37-201ENST00000363768 82 ntBASIC2.09□□□□□ -2.07
USP11P51784 MIR583-201ENST00000384846 75 ntBASIC2.09□□□□□ -2.07
USP11P51784 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
USP11P51784 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
USP11P51784 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
USP11P51784 AP003716.2-201ENST00000528260 108 ntBASIC2.09□□□□□ -2.07
USP11P51784 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
USP11P51784 RNU4-32P-201ENST00000363404 141 ntBASIC2.08□□□□□ -2.08
USP11P51784 MIR1236-201ENST00000408340 102 ntBASIC2.08□□□□□ -2.08
USP11P51784 AL450471.1-201ENST00000447509 127 ntBASIC2.08□□□□□ -2.08
USP11P51784 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
USP11P51784 AC015688.6-201ENST00000577737 104 ntBASIC2.08□□□□□ -2.08
USP11P51784 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
USP11P51784 SNORA4-201ENST00000584302 138 ntBASIC2.08□□□□□ -2.08
USP11P51784 AL512598.1-201ENST00000610158 273 ntBASIC2.08□□□□□ -2.08
USP11P51784 RNU6-624P-201ENST00000363411 107 ntBASIC2.07□□□□□ -2.08
USP11P51784 RNU6-396P-201ENST00000365369 105 ntBASIC2.07□□□□□ -2.08
USP11P51784 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USP11P51784 RNU6-205P-201ENST00000390858 107 ntBASIC2.07□□□□□ -2.08
USP11P51784 RNU6-1165P-201ENST00000410119 107 ntBASIC2.07□□□□□ -2.08
USP11P51784 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
USP11P51784 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
USP11P51784 AC073261.1-201ENST00000429409 121 ntBASIC2.07□□□□□ -2.08
USP11P51784 MIR6845-201ENST00000613182 61 ntBASIC2.07□□□□□ -2.08
USP11P51784 AC008163.1-202ENST00000636004 2889 ntBASIC2.06□□□□□ -2.08
USP11P51784 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
USP11P51784 RNU6-571P-201ENST00000384128 107 ntBASIC2.06□□□□□ -2.08
USP11P51784 MIR9-3-201ENST00000385084 90 ntBASIC2.06□□□□□ -2.08
USP11P51784 RNU6-129P-201ENST00000391022 107 ntBASIC2.06□□□□□ -2.08
USP11P51784 AC003989.2-201ENST00000440224 169 ntBASIC2.06□□□□□ -2.08
USP11P51784 snoU13.11-201ENST00000459219 104 ntBASIC2.06□□□□□ -2.08
USP11P51784 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
USP11P51784 MIR6516-201ENST00000630554 81 ntBASIC2.06□□□□□ -2.08
USP11P51784 RNU6-315P-201ENST00000362666 107 ntBASIC2.05□□□□□ -2.08
USP11P51784 AC245517.4-201ENST00000448601 281 ntBASIC2.05□□□□□ -2.08
USP11P51784 HSPE1P24-201ENST00000450782 238 ntBASIC2.05□□□□□ -2.08
USP11P51784 Y_RNA.648-201ENST00000459455 110 ntBASIC2.05□□□□□ -2.08
USP11P51784 AC023790.1-201ENST00000482174 347 ntBASIC2.05□□□□□ -2.08
USP11P51784 MIR4264-201ENST00000583520 66 ntBASIC2.05□□□□□ -2.08
USP11P51784 AC145423.2-201ENST00000610631 239 ntBASIC2.05□□□□□ -2.08
USP11P51784 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USP11P51784 SNORD36A-201ENST00000362874 73 ntBASIC2.04□□□□□ -2.08
USP11P51784 Y_RNA.508-201ENST00000384502 114 ntBASIC2.04□□□□□ -2.08
USP11P51784 MIR1185-1-201ENST00000408598 86 ntBASIC2.04□□□□□ -2.08
USP11P51784 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.04□□□□□ -2.08
USP11P51784 MIR4713-201ENST00000582691 75 ntBASIC2.04□□□□□ -2.08
USP11P51784 GHRLOS.1-201ENST00000610995 70 ntBASIC2.04□□□□□ -2.08
USP11P51784 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.03□□□□□ -2.08
USP11P51784 Y_RNA.565-201ENST00000384719 101 ntBASIC2.03□□□□□ -2.08
USP11P51784 MIR516A2-201ENST00000384888 90 ntBASIC2.03□□□□□ -2.08
USP11P51784 MIR516A1-201ENST00000385033 90 ntBASIC2.03□□□□□ -2.08
USP11P51784 MT-TN-201ENST00000387400 73 ntBASIC2.03□□□□□ -2.08
USP11P51784 AL357312.1-201ENST00000603879 298 ntBASIC2.03□□□□□ -2.08
USP11P51784 RNU1-17P-201ENST00000363022 152 ntBASIC2.02□□□□□ -2.09
USP11P51784 RNU6-654P-201ENST00000364373 107 ntBASIC2.02□□□□□ -2.09
USP11P51784 RNU7-62P-201ENST00000458856 62 ntBASIC2.02□□□□□ -2.09
USP11P51784 RNU7-106P-201ENST00000459514 67 ntBASIC2.02□□□□□ -2.09
USP11P51784 RNU6-947P-201ENST00000516264 106 ntBASIC2.02□□□□□ -2.09
USP11P51784 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
USP11P51784 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.02□□□□□ -2.09
USP11P51784 Y_RNA.788-201ENST00000622394 112 ntBASIC2.02□□□□□ -2.09
USP11P51784 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USP11P51784 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.01□□□□□ -2.09
USP11P51784 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USP11P51784 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USP11P51784 RNA5SP292-201ENST00000390974 118 ntBASIC2.01□□□□□ -2.09
USP11P51784 RPL30P7-201ENST00000479312 323 ntBASIC2.01□□□□□ -2.09
USP11P51784 Y_RNA.676-201ENST00000516393 96 ntBASIC2.01□□□□□ -2.09
USP11P51784 MIR2115-201ENST00000516657 100 ntBASIC2.01□□□□□ -2.09
USP11P51784 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
USP11P51784 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USP11P51784 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
USP11P51784 Y_RNA.588-201ENST00000391254 102 ntBASIC2□□□□□ -2.09
USP11P51784 RNA5SP95-201ENST00000410319 137 ntBASIC2□□□□□ -2.09
USP11P51784 AL133373.1-201ENST00000497098 94 ntBASIC2□□□□□ -2.09
USP11P51784 RNU6-75P-201ENST00000515944 104 ntBASIC2□□□□□ -2.09
USP11P51784 RNU6-531P-201ENST00000516694 104 ntBASIC2□□□□□ -2.09
USP11P51784 SNORA25.16-201ENST00000516741 121 ntBASIC2□□□□□ -2.09
USP11P51784 MIR4491-201ENST00000581087 68 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms