Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL353813.1-201ENST00000440700 253 ntBASIC1.05□□□□□ -2.24
CIITAP33076 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.05□□□□□ -2.24
CIITAP33076 MIR759-201ENST00000390224 91 ntBASIC1.04□□□□□ -2.24
CIITAP33076 Y_RNA.629-201ENST00000411368 105 ntBASIC1.04□□□□□ -2.24
CIITAP33076 RPS26P5-201ENST00000418544 335 ntBASIC1.04□□□□□ -2.24
CIITAP33076 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
CIITAP33076 FAM71BP1-201ENST00000604431 523 ntBASIC1.04□□□□□ -2.24
CIITAP33076 SNORD114-10-201ENST00000363409 72 ntBASIC1.03□□□□□ -2.24
CIITAP33076 SNORD116-21-201ENST00000384507 92 ntBASIC1.03□□□□□ -2.24
CIITAP33076 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CIITAP33076 Y_RNA.588-201ENST00000391254 102 ntBASIC1.03□□□□□ -2.24
CIITAP33076 MIR548J-201ENST00000408833 112 ntBASIC1.03□□□□□ -2.24
CIITAP33076 RNU7-185P-201ENST00000459215 60 ntBASIC1.03□□□□□ -2.24
CIITAP33076 RNU6-589P-201ENST00000516485 107 ntBASIC1.03□□□□□ -2.24
CIITAP33076 MIR4771-2-201ENST00000577758 74 ntBASIC1.03□□□□□ -2.24
CIITAP33076 MIR3973-201ENST00000579824 107 ntBASIC1.03□□□□□ -2.24
CIITAP33076 MIR548AI-201ENST00000579940 88 ntBASIC1.03□□□□□ -2.24
CIITAP33076 MIR4771-1-201ENST00000582617 74 ntBASIC1.03□□□□□ -2.24
CIITAP33076 AC105081.1-201ENST00000617727 106 ntBASIC1.03□□□□□ -2.24
CIITAP33076 Y_RNA.281-201ENST00000364774 94 ntBASIC1.02□□□□□ -2.25
CIITAP33076 SNORD115-35-201ENST00000365122 82 ntBASIC1.02□□□□□ -2.25
CIITAP33076 RNU1-36P-201ENST00000365130 165 ntBASIC1.02□□□□□ -2.25
CIITAP33076 RNU6-1056P-201ENST00000383996 107 ntBASIC1.02□□□□□ -2.25
CIITAP33076 RNU6-1321P-201ENST00000390905 107 ntBASIC1.02□□□□□ -2.25
CIITAP33076 SNORD77B-201ENST00000391112 67 ntBASIC1.02□□□□□ -2.25
CIITAP33076 AC023934.1-201ENST00000574529 2389 ntBASIC1.02□□□□□ -2.25
CIITAP33076 RNU6-363P-201ENST00000362895 105 ntBASIC1.01□□□□□ -2.25
CIITAP33076 Y_RNA.205-201ENST00000364128 113 ntBASIC1.01□□□□□ -2.25
CIITAP33076 MIR1827-201ENST00000408549 66 ntBASIC1.01□□□□□ -2.25
CIITAP33076 RPL39P34-201ENST00000477141 156 ntBASIC1.01□□□□□ -2.25
CIITAP33076 RNU7-2P-201ENST00000516096 62 ntBASIC1.01□□□□□ -2.25
CIITAP33076 MIR4491-201ENST00000581087 68 ntBASIC1.01□□□□□ -2.25
CIITAP33076 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
CIITAP33076 SNORA63.5-201ENST00000363548 123 ntBASIC1□□□□□ -2.25
CIITAP33076 RNU6-215P-201ENST00000365169 102 ntBASIC1□□□□□ -2.25
CIITAP33076 SNORD20-201ENST00000384550 80 ntBASIC1□□□□□ -2.25
CIITAP33076 FABP5P4-201ENST00000437203 171 ntBASIC1□□□□□ -2.25
CIITAP33076 RNU6-521P-201ENST00000516663 105 ntBASIC1□□□□□ -2.25
CIITAP33076 MIR4676-201ENST00000583078 72 ntBASIC1□□□□□ -2.25
CIITAP33076 AL162726.3-218ENST00000636401 95 ntBASIC1□□□□□ -2.25
CIITAP33076 RNU4-67P-201ENST00000364569 141 ntBASIC0.99□□□□□ -2.25
CIITAP33076 RNU6-1325P-201ENST00000364905 105 ntBASIC0.99□□□□□ -2.25
CIITAP33076 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
CIITAP33076 RNU6-880P-201ENST00000384526 107 ntBASIC0.99□□□□□ -2.25
CIITAP33076 MIR125B2-201ENST00000385128 89 ntBASIC0.99□□□□□ -2.25
CIITAP33076 RNU6-679P-201ENST00000391003 106 ntBASIC0.99□□□□□ -2.25
CIITAP33076 RNU6-994P-201ENST00000410507 111 ntBASIC0.99□□□□□ -2.25
CIITAP33076 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.99□□□□□ -2.25
CIITAP33076 PDCD5P2-201ENST00000507570 312 ntBASIC0.99□□□□□ -2.25
CIITAP33076 AC138749.4-201ENST00000563970 127 ntBASIC0.99□□□□□ -2.25
CIITAP33076 MIR4804-201ENST00000581683 73 ntBASIC0.99□□□□□ -2.25
CIITAP33076 MIR8066-201ENST00000617280 78 ntBASIC0.99□□□□□ -2.25
CIITAP33076 U8.6-201ENST00000364939 135 ntBASIC0.98□□□□□ -2.25
CIITAP33076 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CIITAP33076 Y_RNA.448-201ENST00000384185 108 ntBASIC0.98□□□□□ -2.25
CIITAP33076 MIR605-201ENST00000385078 83 ntBASIC0.98□□□□□ -2.25
CIITAP33076 RNU6-816P-201ENST00000390914 107 ntBASIC0.98□□□□□ -2.25
CIITAP33076 RNU6-1268P-201ENST00000391214 107 ntBASIC0.98□□□□□ -2.25
CIITAP33076 RNU6-1239P-201ENST00000391310 107 ntBASIC0.98□□□□□ -2.25
CIITAP33076 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
CIITAP33076 SNORD93-201ENST00000408813 74 ntBASIC0.98□□□□□ -2.25
CIITAP33076 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
CIITAP33076 RNU7-56P-201ENST00000458744 62 ntBASIC0.98□□□□□ -2.25
CIITAP33076 Y_RNA.709-201ENST00000516952 92 ntBASIC0.98□□□□□ -2.25
CIITAP33076 AC068339.1-201ENST00000526965 141 ntBASIC0.98□□□□□ -2.25
CIITAP33076 RN7SL793P-201ENST00000583259 296 ntBASIC0.98□□□□□ -2.25
CIITAP33076 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
CIITAP33076 RNY4P18-201ENST00000391107 89 ntBASIC0.97□□□□□ -2.25
CIITAP33076 MIR942-201ENST00000401111 86 ntBASIC0.97□□□□□ -2.25
CIITAP33076 MIR1257-201ENST00000408490 117 ntBASIC0.97□□□□□ -2.25
CIITAP33076 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.97□□□□□ -2.25
CIITAP33076 RNU6-1110P-201ENST00000516462 101 ntBASIC0.97□□□□□ -2.25
CIITAP33076 SNORA25.16-201ENST00000516741 121 ntBASIC0.97□□□□□ -2.25
CIITAP33076 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
CIITAP33076 AC008608.1-201ENST00000603910 127 ntBASIC0.97□□□□□ -2.25
CIITAP33076 MIR376B-201ENST00000614515 100 ntBASIC0.97□□□□□ -2.25
CIITAP33076 MIR1-1-201ENST00000362147 71 ntBASIC0.96□□□□□ -2.26
CIITAP33076 Y_RNA.42-201ENST00000362660 108 ntBASIC0.96□□□□□ -2.26
CIITAP33076 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
CIITAP33076 RNU6-1107P-201ENST00000364817 104 ntBASIC0.96□□□□□ -2.26
CIITAP33076 RNY1P2-201ENST00000364820 117 ntBASIC0.96□□□□□ -2.26
CIITAP33076 Y_RNA.323-201ENST00000365157 109 ntBASIC0.96□□□□□ -2.26
CIITAP33076 Y_RNA.328-201ENST00000365208 113 ntBASIC0.96□□□□□ -2.26
CIITAP33076 MIR34C-201ENST00000384831 77 ntBASIC0.96□□□□□ -2.26
CIITAP33076 MIR216A-201ENST00000385063 110 ntBASIC0.96□□□□□ -2.26
CIITAP33076 SNORD89-201ENST00000390981 114 ntBASIC0.96□□□□□ -2.26
CIITAP33076 SNORA7.5-201ENST00000410672 110 ntBASIC0.96□□□□□ -2.26
CIITAP33076 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.96□□□□□ -2.26
CIITAP33076 RNU7-48P-201ENST00000458875 63 ntBASIC0.96□□□□□ -2.26
CIITAP33076 RNU6-1006P-201ENST00000516998 103 ntBASIC0.96□□□□□ -2.26
CIITAP33076 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
CIITAP33076 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
CIITAP33076 MIR5009-201ENST00000578736 100 ntBASIC0.96□□□□□ -2.26
CIITAP33076 SNORD92-201ENST00000585078 85 ntBASIC0.96□□□□□ -2.26
CIITAP33076 RNA5SP133-201ENST00000363368 119 ntBASIC0.95□□□□□ -2.26
CIITAP33076 MIR100-201ENST00000385259 80 ntBASIC0.95□□□□□ -2.26
CIITAP33076 RNU6-447P-201ENST00000410293 104 ntBASIC0.95□□□□□ -2.26
CIITAP33076 RNU6-1118P-201ENST00000410382 104 ntBASIC0.95□□□□□ -2.26
CIITAP33076 MIR1912-201ENST00000410389 80 ntBASIC0.95□□□□□ -2.26
CIITAP33076 RNU6-1076P-201ENST00000410397 104 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms