Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 Y_RNA.235-201ENST00000364412 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.306-201ENST00000365015 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.308-201ENST00000365043 101 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.312-201ENST00000365089 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.322-201ENST00000365151 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 RNU6-20P-201ENST00000384106 107 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.527-201ENST00000384573 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 RNU6-308P-201ENST00000390957 107 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.650-201ENST00000459002 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.777-201ENST00000516982 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.771-201ENST00000598668 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.789-201ENST00000622480 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 RNU6-1301P-201ENST00000362724 104 ntBASIC-3.21□□□□□ -2.92
HMGA1P17096 Y_RNA.98-201ENST00000363109 102 ntBASIC-3.21□□□□□ -2.92
HMGA1P17096 Y_RNA.199-201ENST00000364014 102 ntBASIC-3.21□□□□□ -2.92
HMGA1P17096 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.21□□□□□ -2.92
HMGA1P17096 MIR206-201ENST00000384872 86 ntBASIC-3.21□□□□□ -2.92
HMGA1P17096 SNORD37.1-201ENST00000390968 65 ntBASIC-3.21□□□□□ -2.92
HMGA1P17096 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-3.21□□□□□ -2.92
HMGA1P17096 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-3.21□□□□□ -2.92
HMGA1P17096 AC009161.2-201ENST00000624626 138 ntBASIC-3.21□□□□□ -2.92
HMGA1P17096 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 Y_RNA.348-201ENST00000365403 103 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 RNU6-996P-201ENST00000365438 107 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 RNU6-1307P-201ENST00000391012 103 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 RPS3AP52-201ENST00000435639 297 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 AL356010.1-201ENST00000456364 102 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 MIR3145-201ENST00000580727 82 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 MIR5197-201ENST00000583721 112 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-3.22□□□□□ -2.92
HMGA1P17096 Y_RNA.127-201ENST00000363386 109 ntBASIC-3.23□□□□□ -2.93
HMGA1P17096 RNU6-957P-201ENST00000363652 99 ntBASIC-3.23□□□□□ -2.93
HMGA1P17096 RNU7-63P-201ENST00000459054 62 ntBASIC-3.23□□□□□ -2.93
HMGA1P17096 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-3.23□□□□□ -2.93
HMGA1P17096 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-3.23□□□□□ -2.93
HMGA1P17096 AC120024.2-201ENST00000576526 175 ntBASIC-3.23□□□□□ -2.93
HMGA1P17096 SNORD27-201ENST00000363981 72 ntBASIC-3.24□□□□□ -2.93
HMGA1P17096 RNU6-990P-201ENST00000364385 104 ntBASIC-3.24□□□□□ -2.93
HMGA1P17096 RNU6-1040P-201ENST00000383974 107 ntBASIC-3.24□□□□□ -2.93
HMGA1P17096 SNORD101-201ENST00000384027 73 ntBASIC-3.24□□□□□ -2.93
HMGA1P17096 MIR1255B2-201ENST00000408618 67 ntBASIC-3.24□□□□□ -2.93
HMGA1P17096 AC087741.2-201ENST00000619415 172 ntBASIC-3.24□□□□□ -2.93
HMGA1P17096 RNU6-626P-201ENST00000363354 107 ntBASIC-3.25□□□□□ -2.93
HMGA1P17096 RNA5SP144-201ENST00000410846 116 ntBASIC-3.25□□□□□ -2.93
HMGA1P17096 MTCO2P21-201ENST00000419780 677 ntBASIC-3.25□□□□□ -2.93
HMGA1P17096 AC107399.1-201ENST00000451226 265 ntBASIC-3.25□□□□□ -2.93
HMGA1P17096 RNU7-88P-201ENST00000458752 63 ntBASIC-3.25□□□□□ -2.93
HMGA1P17096 AC097484.2-201ENST00000509147 251 ntBASIC-3.25□□□□□ -2.93
HMGA1P17096 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-3.25□□□□□ -2.93
HMGA1P17096 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.25□□□□□ -2.93
HMGA1P17096 MIR5693-201ENST00000577722 73 ntBASIC-3.26□□□□□ -2.93
HMGA1P17096 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-3.26□□□□□ -2.93
HMGA1P17096 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 Y_RNA.80-201ENST00000362996 102 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 Y_RNA.120-201ENST00000363304 110 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 RNU6-608P-201ENST00000383927 104 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 MIR451A-201ENST00000385059 72 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 RNU6-243P-201ENST00000391140 107 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 Z83846.1-201ENST00000446798 265 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 RNU6-276P-201ENST00000516114 96 ntBASIC-3.27□□□□□ -2.93
HMGA1P17096 RNU6-181P-201ENST00000363225 107 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-3.28□□□□□ -2.93
HMGA1P17096 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 MIR1270-201ENST00000459320 83 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 RNU6-445P-201ENST00000516949 107 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-3.28□□□□□ -2.93
HMGA1P17096 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.28□□□□□ -2.93
HMGA1P17096 RNU6-1059P-201ENST00000363752 98 ntBASIC-3.29□□□□□ -2.94
HMGA1P17096 RNU6-1254P-201ENST00000391266 104 ntBASIC-3.29□□□□□ -2.94
HMGA1P17096 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-3.29□□□□□ -2.94
HMGA1P17096 MIR4696-201ENST00000581431 70 ntBASIC-3.29□□□□□ -2.94
HMGA1P17096 AC009779.6-201ENST00000603972 165 ntBASIC-3.29□□□□□ -2.94
HMGA1P17096 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 RNU6-1205P-201ENST00000363625 106 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 Y_RNA.381-201ENST00000365666 102 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 SNORD115-47-201ENST00000391226 86 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 MIR513C-201ENST00000401352 84 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 MIR548Q-201ENST00000408404 100 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 RNU6-935P-201ENST00000410371 100 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 MIR548AB-201ENST00000584917 84 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 MIR376B-201ENST00000614515 100 ntBASIC-3.3□□□□□ -2.94
HMGA1P17096 RNU6-1252P-201ENST00000363054 104 ntBASIC-3.31□□□□□ -2.94
HMGA1P17096 RNU6-801P-201ENST00000364087 105 ntBASIC-3.31□□□□□ -2.94
HMGA1P17096 Y_RNA.569-201ENST00000384749 103 ntBASIC-3.31□□□□□ -2.94
HMGA1P17096 RNU6-987P-201ENST00000384759 104 ntBASIC-3.31□□□□□ -2.94
HMGA1P17096 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-3.31□□□□□ -2.94
HMGA1P17096 Y_RNA.677-201ENST00000516401 85 ntBASIC-3.31□□□□□ -2.94
HMGA1P17096 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-3.31□□□□□ -2.94
HMGA1P17096 AC099654.14-201ENST00000638599 341 ntBASIC-3.31□□□□□ -2.94
HMGA1P17096 RNU6-664P-201ENST00000362381 107 ntBASIC-3.32□□□□□ -2.94
HMGA1P17096 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.32□□□□□ -2.94
HMGA1P17096 RNU6-694P-201ENST00000364071 147 ntBASIC-3.32□□□□□ -2.94
HMGA1P17096 Y_RNA.463-201ENST00000384271 102 ntBASIC-3.32□□□□□ -2.94
HMGA1P17096 RNU6-1052P-201ENST00000411398 104 ntBASIC-3.32□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms