Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MIR593-201ENST00000384856 100 ntBASIC-0.14□□□□□ -2.43
HMGB1P09429 MIR489-201ENST00000384923 84 ntBASIC-0.14□□□□□ -2.43
HMGB1P09429 RNU7-104P-201ENST00000459398 79 ntBASIC-0.14□□□□□ -2.43
HMGB1P09429 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.14□□□□□ -2.43
HMGB1P09429 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.15□□□□□ -2.43
HMGB1P09429 RNU6-47P-201ENST00000383866 107 ntBASIC-0.15□□□□□ -2.43
HMGB1P09429 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.15□□□□□ -2.43
HMGB1P09429 SNORD18B-201ENST00000365659 72 ntBASIC-0.16□□□□□ -2.44
HMGB1P09429 RNU6-429P-201ENST00000384582 108 ntBASIC-0.16□□□□□ -2.44
HMGB1P09429 RNU6-588P-201ENST00000410281 105 ntBASIC-0.16□□□□□ -2.44
HMGB1P09429 AC244505.6-201ENST00000452829 130 ntBASIC-0.16□□□□□ -2.44
HMGB1P09429 MIR1273G-201ENST00000577677 100 ntBASIC-0.16□□□□□ -2.44
HMGB1P09429 U4.1-201ENST00000620349 87 ntBASIC-0.16□□□□□ -2.44
HMGB1P09429 RNU6-312P-201ENST00000364629 107 ntBASIC-0.17□□□□□ -2.44
HMGB1P09429 RNU6-726P-201ENST00000364680 107 ntBASIC-0.17□□□□□ -2.44
HMGB1P09429 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.17□□□□□ -2.44
HMGB1P09429 MIR4500-201ENST00000579472 76 ntBASIC-0.17□□□□□ -2.44
HMGB1P09429 MIR4290-201ENST00000583807 95 ntBASIC-0.17□□□□□ -2.44
HMGB1P09429 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.18□□□□□ -2.44
HMGB1P09429 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.18□□□□□ -2.44
HMGB1P09429 MIR145-201ENST00000384967 88 ntBASIC-0.18□□□□□ -2.44
HMGB1P09429 RNA5SP63-201ENST00000391225 112 ntBASIC-0.18□□□□□ -2.44
HMGB1P09429 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.18□□□□□ -2.44
HMGB1P09429 MIR5190-201ENST00000581537 80 ntBASIC-0.18□□□□□ -2.44
HMGB1P09429 RNU7-10P-201ENST00000607194 63 ntBASIC-0.18□□□□□ -2.44
HMGB1P09429 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.19□□□□□ -2.44
HMGB1P09429 RNU6-694P-201ENST00000364071 147 ntBASIC-0.19□□□□□ -2.44
HMGB1P09429 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.19□□□□□ -2.44
HMGB1P09429 SNORD37.2-201ENST00000391075 66 ntBASIC-0.19□□□□□ -2.44
HMGB1P09429 RNU4-69P-201ENST00000410677 143 ntBASIC-0.19□□□□□ -2.44
HMGB1P09429 MIR613-201ENST00000385248 95 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 AC108059.2-201ENST00000434626 151 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 RNU7-123P-201ENST00000515911 60 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 RNU7-161P-201ENST00000517289 62 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 MIR3149-201ENST00000584629 83 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 AC067863.3-201ENST00000624172 122 ntBASIC-0.2□□□□□ -2.44
HMGB1P09429 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.21□□□□□ -2.44
HMGB1P09429 MIR635-201ENST00000384830 98 ntBASIC-0.21□□□□□ -2.44
HMGB1P09429 SNORD77B-201ENST00000391112 67 ntBASIC-0.21□□□□□ -2.44
HMGB1P09429 MIR8087-201ENST00000612745 78 ntBASIC-0.21□□□□□ -2.44
HMGB1P09429 SNORD114-26-201ENST00000363543 72 ntBASIC-0.22□□□□□ -2.44
HMGB1P09429 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.22□□□□□ -2.44
HMGB1P09429 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.23□□□□□ -2.45
HMGB1P09429 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.23□□□□□ -2.45
HMGB1P09429 MIR1270-201ENST00000459320 83 ntBASIC-0.23□□□□□ -2.45
HMGB1P09429 RNU1-29P-201ENST00000606574 126 ntBASIC-0.23□□□□□ -2.45
HMGB1P09429 RNU6-652P-201ENST00000365488 107 ntBASIC-0.24□□□□□ -2.45
HMGB1P09429 RNU7-48P-201ENST00000458875 63 ntBASIC-0.24□□□□□ -2.45
HMGB1P09429 AC022559.1-201ENST00000520905 205 ntBASIC-0.24□□□□□ -2.45
HMGB1P09429 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 MIR206-201ENST00000384872 86 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 MIR892B-201ENST00000401279 77 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 RNU2-60P-201ENST00000517290 128 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 AC141557.1-201ENST00000540982 400 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 MIR3646-201ENST00000578301 84 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 SNORA70.25-201ENST00000612741 95 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 AL162376.1-201ENST00000624117 175 ntBASIC-0.25□□□□□ -2.45
HMGB1P09429 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.26□□□□□ -2.45
HMGB1P09429 RNU6-196P-201ENST00000384315 107 ntBASIC-0.26□□□□□ -2.45
HMGB1P09429 RNU6-782P-201ENST00000516852 104 ntBASIC-0.26□□□□□ -2.45
HMGB1P09429 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.27□□□□□ -2.45
HMGB1P09429 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.27□□□□□ -2.45
HMGB1P09429 MIR599-201ENST00000385069 95 ntBASIC-0.27□□□□□ -2.45
HMGB1P09429 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.27□□□□□ -2.45
HMGB1P09429 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.27□□□□□ -2.45
HMGB1P09429 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.28□□□□□ -2.45
HMGB1P09429 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.28□□□□□ -2.45
HMGB1P09429 MIR5706-201ENST00000579841 80 ntBASIC-0.28□□□□□ -2.45
HMGB1P09429 MIR4503-201ENST00000582187 83 ntBASIC-0.28□□□□□ -2.45
HMGB1P09429 U7.6-201ENST00000610841 64 ntBASIC-0.28□□□□□ -2.45
HMGB1P09429 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.29□□□□□ -2.46
HMGB1P09429 RNU6-508P-201ENST00000363231 103 ntBASIC-0.29□□□□□ -2.46
HMGB1P09429 RNU6-239P-201ENST00000390990 99 ntBASIC-0.29□□□□□ -2.46
HMGB1P09429 MIR1197-201ENST00000408818 88 ntBASIC-0.29□□□□□ -2.46
HMGB1P09429 BX276092.1-201ENST00000427368 251 ntBASIC-0.29□□□□□ -2.46
HMGB1P09429 TRAJ51-201ENST00000504127 63 ntBASIC-0.29□□□□□ -2.46
HMGB1P09429 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.29□□□□□ -2.46
HMGB1P09429 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.29□□□□□ -2.46
HMGB1P09429 RNA5SP403-201ENST00000363598 108 ntBASIC-0.3□□□□□ -2.46
HMGB1P09429 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
HMGB1P09429 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.3□□□□□ -2.46
HMGB1P09429 MTND3P2-201ENST00000438452 342 ntBASIC-0.3□□□□□ -2.46
HMGB1P09429 MIR3658-201ENST00000636291 56 ntBASIC-0.3□□□□□ -2.46
HMGB1P09429 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.31□□□□□ -2.46
HMGB1P09429 RNU6-309P-201ENST00000364573 106 ntBASIC-0.31□□□□□ -2.46
HMGB1P09429 MIR501-201ENST00000390204 84 ntBASIC-0.31□□□□□ -2.46
HMGB1P09429 RNA5SP330-201ENST00000517096 96 ntBASIC-0.31□□□□□ -2.46
HMGB1P09429 AC009779.6-201ENST00000603972 165 ntBASIC-0.31□□□□□ -2.46
HMGB1P09429 RNU6-865P-201ENST00000364772 107 ntBASIC-0.32□□□□□ -2.46
HMGB1P09429 RNU6-302P-201ENST00000365249 107 ntBASIC-0.32□□□□□ -2.46
HMGB1P09429 RNU6-269P-201ENST00000391077 97 ntBASIC-0.32□□□□□ -2.46
HMGB1P09429 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.32□□□□□ -2.46
HMGB1P09429 AC130289.1-201ENST00000577321 73 ntBASIC-0.32□□□□□ -2.46
HMGB1P09429 MIR4743-201ENST00000584576 69 ntBASIC-0.32□□□□□ -2.46
HMGB1P09429 RNU6-449P-201ENST00000383914 107 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 265.5 ms