Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SNORD92-201ENST00000585078 85 ntBASIC0.72□□□□□ -2.29
CLPTM1O96005 MIR8066-201ENST00000617280 78 ntBASIC0.72□□□□□ -2.29
CLPTM1O96005 AC087741.2-201ENST00000619415 172 ntBASIC0.72□□□□□ -2.29
CLPTM1O96005 U6.109-201ENST00000636749 87 ntBASIC0.72□□□□□ -2.29
CLPTM1O96005 RNA5SP133-201ENST00000363368 119 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 RNU6-81P-201ENST00000365608 104 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 MIR598-201ENST00000384868 97 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 MIR759-201ENST00000390224 91 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 RNU6-1321P-201ENST00000390905 107 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 RNU1-119P-201ENST00000391122 165 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 SNORA25.16-201ENST00000516741 121 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 AC025627.3-201ENST00000582078 182 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 Y_RNA.773-201ENST00000607168 90 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.71□□□□□ -2.3
CLPTM1O96005 MIR1255B1-201ENST00000636325 63 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 MIR3914-2-201ENST00000637339 95 ntBASIC0.71□□□□□ -2.3
CLPTM1O96005 Y_RNA.42-201ENST00000362660 108 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 SNORD114-10-201ENST00000363409 72 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 Y_RNA.261-201ENST00000364631 102 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 Y_RNA.448-201ENST00000384185 108 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 MIR548D2-201ENST00000384955 97 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-447P-201ENST00000410293 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-1118P-201ENST00000410382 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-1076P-201ENST00000410397 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-355P-201ENST00000410427 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-791P-201ENST00000410467 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-705P-201ENST00000410601 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-1100P-201ENST00000410691 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-860P-201ENST00000410860 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-1217P-201ENST00000411276 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 RNU6-785P-201ENST00000411324 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 Y_RNA.712-201ENST00000517011 92 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 AC133485.1-201ENST00000567176 124 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 AC011195.1-201ENST00000578177 177 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 AL353765.1-201ENST00000605514 183 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 MIR6082-201ENST00000613604 109 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 U6.90-201ENST00000614007 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 AL365222.1-201ENST00000614661 98 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 U6.70-201ENST00000620287 104 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 AC132825.6-201ENST00000638861 357 ntBASIC0.7□□□□□ -2.3
CLPTM1O96005 Y_RNA.127-201ENST00000363386 109 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 Y_RNA.346-201ENST00000365385 112 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 MIR573-201ENST00000384964 99 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 MIR548J-201ENST00000408833 112 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 RNU4-61P-201ENST00000411243 107 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 AC244098.3-201ENST00000424803 96 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 RNU7-2P-201ENST00000516096 62 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 DEFB131E-201ENST00000532329 154 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 AC138749.4-201ENST00000563970 127 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 AC022709.1-201ENST00000615967 87 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
CLPTM1O96005 SNORD115-19-201ENST00000363098 82 ntBASIC0.68□□□□□ -2.3
CLPTM1O96005 SNORD115-18-201ENST00000363293 82 ntBASIC0.68□□□□□ -2.3
CLPTM1O96005 SNORD115-17-201ENST00000364612 82 ntBASIC0.68□□□□□ -2.3
CLPTM1O96005 Y_RNA.344-201ENST00000365381 112 ntBASIC0.68□□□□□ -2.3
CLPTM1O96005 RNU6-531P-201ENST00000516694 104 ntBASIC0.68□□□□□ -2.3
CLPTM1O96005 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CLPTM1O96005 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CLPTM1O96005 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CLPTM1O96005 SNORD114-26-201ENST00000363543 72 ntBASIC0.67□□□□□ -2.3
CLPTM1O96005 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CLPTM1O96005 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
CLPTM1O96005 MTND5P34-201ENST00000568888 325 ntBASIC0.67□□□□□ -2.3
CLPTM1O96005 AC090897.1-201ENST00000580909 226 ntBASIC0.67□□□□□ -2.3
CLPTM1O96005 SNORD115-35-201ENST00000365122 82 ntBASIC0.66□□□□□ -2.3
CLPTM1O96005 AC008267.6-201ENST00000441664 139 ntBASIC0.66□□□□□ -2.3
CLPTM1O96005 RNU7-48P-201ENST00000458875 63 ntBASIC0.66□□□□□ -2.3
CLPTM1O96005 Y_RNA.649-201ENST00000459077 103 ntBASIC0.66□□□□□ -2.3
CLPTM1O96005 RNU6-521P-201ENST00000516663 105 ntBASIC0.66□□□□□ -2.3
CLPTM1O96005 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
CLPTM1O96005 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
CLPTM1O96005 AL035470.1-201ENST00000622571 220 ntBASIC0.66□□□□□ -2.3
CLPTM1O96005 Y_RNA.119-201ENST00000363301 96 ntBASIC0.65□□□□□ -2.31
CLPTM1O96005 Y_RNA.362-201ENST00000365518 110 ntBASIC0.65□□□□□ -2.31
CLPTM1O96005 RNY1P8-201ENST00000383970 114 ntBASIC0.65□□□□□ -2.31
CLPTM1O96005 MIR548A1-201ENST00000385041 97 ntBASIC0.65□□□□□ -2.31
CLPTM1O96005 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
CLPTM1O96005 RNU6-448P-201ENST00000517052 107 ntBASIC0.65□□□□□ -2.31
CLPTM1O96005 MIR6779-201ENST00000617283 64 ntBASIC0.65□□□□□ -2.31
CLPTM1O96005 U6.95-201ENST00000636931 70 ntBASIC0.65□□□□□ -2.31
CLPTM1O96005 RNU4-58P-201ENST00000363192 141 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 RNY4P6-201ENST00000363667 96 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 RNU6-865P-201ENST00000364772 107 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 RNY1P2-201ENST00000364820 117 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 Y_RNA.353-201ENST00000365440 108 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 RNU6-22P-201ENST00000384355 107 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 RNU6-1117P-201ENST00000384525 104 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 SNORA7.5-201ENST00000410672 110 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 Y_RNA.697-201ENST00000516776 113 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 RNU6-765P-201ENST00000516916 99 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 MIR376B-201ENST00000614515 100 ntBASIC0.64□□□□□ -2.31
CLPTM1O96005 RNU4-67P-201ENST00000364569 141 ntBASIC0.63□□□□□ -2.31
CLPTM1O96005 Y_RNA.328-201ENST00000365208 113 ntBASIC0.63□□□□□ -2.31
CLPTM1O96005 Y_RNA.549-201ENST00000384657 102 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 250.7 ms