Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 SNORA8.2-201ENST00000384372 139 ntBASIC0.39□□□□□ -2.35
DDX58O95786 SNORD67.1-201ENST00000516618 108 ntBASIC0.39□□□□□ -2.35
DDX58O95786 AC112693.2-201ENST00000556538 232 ntBASIC0.39□□□□□ -2.35
DDX58O95786 AC022523.2-201ENST00000561045 150 ntBASIC0.39□□□□□ -2.35
DDX58O95786 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.39□□□□□ -2.35
DDX58O95786 MIR101-2-201ENST00000362195 79 ntBASIC0.38□□□□□ -2.35
DDX58O95786 RNA5SP257-201ENST00000363023 116 ntBASIC0.38□□□□□ -2.35
DDX58O95786 RNU6-508P-201ENST00000363231 103 ntBASIC0.38□□□□□ -2.35
DDX58O95786 Y_RNA.257-201ENST00000364596 102 ntBASIC0.38□□□□□ -2.35
DDX58O95786 RNU4-11P-201ENST00000365287 132 ntBASIC0.38□□□□□ -2.35
DDX58O95786 RNU6-291P-201ENST00000384720 107 ntBASIC0.38□□□□□ -2.35
DDX58O95786 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
DDX58O95786 Y_RNA.686-201ENST00000516548 134 ntBASIC0.38□□□□□ -2.35
DDX58O95786 SNORA62.5-201ENST00000516634 120 ntBASIC0.38□□□□□ -2.35
DDX58O95786 Y_RNA.700-201ENST00000516806 100 ntBASIC0.38□□□□□ -2.35
DDX58O95786 AC004792.1-201ENST00000614523 137 ntBASIC0.38□□□□□ -2.35
DDX58O95786 AC105081.1-201ENST00000617727 106 ntBASIC0.38□□□□□ -2.35
DDX58O95786 RNY1P11-201ENST00000363759 113 ntBASIC0.37□□□□□ -2.35
DDX58O95786 RNU6-682P-201ENST00000363843 106 ntBASIC0.37□□□□□ -2.35
DDX58O95786 Y_RNA.272-201ENST00000364696 102 ntBASIC0.37□□□□□ -2.35
DDX58O95786 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.37□□□□□ -2.35
DDX58O95786 RNU6-151P-201ENST00000364158 107 ntBASIC0.36□□□□□ -2.35
DDX58O95786 Y_RNA.299-201ENST00000364973 94 ntBASIC0.36□□□□□ -2.35
DDX58O95786 Y_RNA.441-201ENST00000384123 112 ntBASIC0.36□□□□□ -2.35
DDX58O95786 AL603914.1-201ENST00000401964 204 ntBASIC0.36□□□□□ -2.35
DDX58O95786 RNU7-123P-201ENST00000515911 60 ntBASIC0.36□□□□□ -2.35
DDX58O95786 RNU6-135P-201ENST00000516769 101 ntBASIC0.36□□□□□ -2.35
DDX58O95786 RNU7-137P-201ENST00000516788 62 ntBASIC0.36□□□□□ -2.35
DDX58O95786 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
DDX58O95786 SNORD114-10-201ENST00000363409 72 ntBASIC0.35□□□□□ -2.35
DDX58O95786 SNORA36.1-201ENST00000363424 132 ntBASIC0.35□□□□□ -2.35
DDX58O95786 SNORD118-201ENST00000363593 134 ntBASIC0.35□□□□□ -2.35
DDX58O95786 Y_RNA.366-201ENST00000365540 102 ntBASIC0.35□□□□□ -2.35
DDX58O95786 RNU4-69P-201ENST00000410677 143 ntBASIC0.35□□□□□ -2.35
DDX58O95786 RNU6-1135P-201ENST00000411083 103 ntBASIC0.35□□□□□ -2.35
DDX58O95786 SUMO1P3-201ENST00000439961 304 ntBASIC0.35□□□□□ -2.35
DDX58O95786 Y_RNA.651-201ENST00000459380 103 ntBASIC0.35□□□□□ -2.35
DDX58O95786 RNA5SP268-201ENST00000516828 124 ntBASIC0.35□□□□□ -2.35
DDX58O95786 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.35□□□□□ -2.35
DDX58O95786 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
DDX58O95786 Y_RNA.119-201ENST00000363301 96 ntBASIC0.34□□□□□ -2.36
DDX58O95786 Y_RNA.298-201ENST00000364960 107 ntBASIC0.34□□□□□ -2.36
DDX58O95786 RNU6-449P-201ENST00000383914 107 ntBASIC0.34□□□□□ -2.36
DDX58O95786 SNORD77B-201ENST00000391112 67 ntBASIC0.34□□□□□ -2.36
DDX58O95786 AC074198.2-201ENST00000508153 258 ntBASIC0.34□□□□□ -2.36
DDX58O95786 AL137067.1-201ENST00000615933 120 ntBASIC0.34□□□□□ -2.36
DDX58O95786 MIR2909-201ENST00000617113 69 ntBASIC0.34□□□□□ -2.36
DDX58O95786 MIRLET7F2-201ENST00000385277 83 ntBASIC0.33□□□□□ -2.36
DDX58O95786 SNRPGP12-201ENST00000449481 213 ntBASIC0.33□□□□□ -2.36
DDX58O95786 RNA5SP227-201ENST00000516184 113 ntBASIC0.33□□□□□ -2.36
DDX58O95786 RNU6-182P-201ENST00000516970 105 ntBASIC0.33□□□□□ -2.36
DDX58O95786 AC138749.4-201ENST00000563970 127 ntBASIC0.33□□□□□ -2.36
DDX58O95786 AL359881.1-201ENST00000602916 267 ntBASIC0.33□□□□□ -2.36
DDX58O95786 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
DDX58O95786 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
DDX58O95786 AC098479.1-201ENST00000609225 154 ntBASIC0.32□□□□□ -2.36
DDX58O95786 RNA5SP62-201ENST00000363457 110 ntBASIC0.31□□□□□ -2.36
DDX58O95786 RNU6-1099P-201ENST00000363533 107 ntBASIC0.31□□□□□ -2.36
DDX58O95786 Y_RNA.785-201ENST00000384290 109 ntBASIC0.31□□□□□ -2.36
DDX58O95786 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
DDX58O95786 MIR513C-201ENST00000401352 84 ntBASIC0.31□□□□□ -2.36
DDX58O95786 Y_RNA.681-201ENST00000516445 113 ntBASIC0.31□□□□□ -2.36
DDX58O95786 Y_RNA.778-201ENST00000620203 90 ntBASIC0.31□□□□□ -2.36
DDX58O95786 SNORA63.5-201ENST00000363548 123 ntBASIC0.3□□□□□ -2.36
DDX58O95786 RNU4-67P-201ENST00000364569 141 ntBASIC0.3□□□□□ -2.36
DDX58O95786 SNORD116-18-201ENST00000383961 92 ntBASIC0.3□□□□□ -2.36
DDX58O95786 SCARNA16.5-201ENST00000517114 183 ntBASIC0.3□□□□□ -2.36
DDX58O95786 MIR4639-201ENST00000584938 69 ntBASIC0.3□□□□□ -2.36
DDX58O95786 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
DDX58O95786 Y_RNA.8-201ENST00000362353 102 ntBASIC0.29□□□□□ -2.36
DDX58O95786 Y_RNA.49-201ENST00000362714 112 ntBASIC0.29□□□□□ -2.36
DDX58O95786 Y_RNA.68-201ENST00000362881 102 ntBASIC0.29□□□□□ -2.36
DDX58O95786 RNA5SP245-201ENST00000364239 121 ntBASIC0.29□□□□□ -2.36
DDX58O95786 SNORD28-201ENST00000384706 75 ntBASIC0.29□□□□□ -2.36
DDX58O95786 RNU6-460P-201ENST00000391158 108 ntBASIC0.29□□□□□ -2.36
DDX58O95786 RNA5SP63-201ENST00000391225 112 ntBASIC0.29□□□□□ -2.36
DDX58O95786 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
DDX58O95786 AC073261.1-201ENST00000429409 121 ntBASIC0.29□□□□□ -2.36
DDX58O95786 RNY4P20-201ENST00000516678 93 ntBASIC0.29□□□□□ -2.36
DDX58O95786 AC244669.1-204ENST00000621564 178 ntBASIC0.29□□□□□ -2.36
DDX58O95786 AC091304.10-201ENST00000641554 121 ntBASIC0.29□□□□□ -2.36
DDX58O95786 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
DDX58O95786 RNU6-1130P-201ENST00000365434 107 ntBASIC0.28□□□□□ -2.36
DDX58O95786 Y_RNA.692-201ENST00000516627 105 ntBASIC0.28□□□□□ -2.36
DDX58O95786 RNA5SP47-201ENST00000517230 109 ntBASIC0.28□□□□□ -2.36
DDX58O95786 MIR4500-201ENST00000579472 76 ntBASIC0.28□□□□□ -2.36
DDX58O95786 AC108081.1-201ENST00000604358 221 ntBASIC0.28□□□□□ -2.36
DDX58O95786 MIR6718-201ENST00000616153 80 ntBASIC0.28□□□□□ -2.36
DDX58O95786 Y_RNA.56-201ENST00000362798 112 ntBASIC0.27□□□□□ -2.37
DDX58O95786 RNY1P2-201ENST00000364820 117 ntBASIC0.27□□□□□ -2.37
DDX58O95786 Y_RNA.448-201ENST00000384185 108 ntBASIC0.27□□□□□ -2.37
DDX58O95786 RNU6-1321P-201ENST00000390905 107 ntBASIC0.27□□□□□ -2.37
DDX58O95786 AC069271.1-201ENST00000445577 156 ntBASIC0.27□□□□□ -2.37
DDX58O95786 MIR1270-201ENST00000459320 83 ntBASIC0.27□□□□□ -2.37
DDX58O95786 RNU6-863P-201ENST00000515989 104 ntBASIC0.27□□□□□ -2.37
DDX58O95786 Y_RNA.270-201ENST00000364693 104 ntBASIC0.26□□□□□ -2.37
DDX58O95786 RNU6-915P-201ENST00000364943 103 ntBASIC0.26□□□□□ -2.37
DDX58O95786 RNU6-429P-201ENST00000384582 108 ntBASIC0.26□□□□□ -2.37
DDX58O95786 MIR206-201ENST00000384872 86 ntBASIC0.26□□□□□ -2.37
DDX58O95786 MIR548H5-201ENST00000580314 60 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms