Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU6-238P-201ENST00000363313 106 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 SNORA18.1-201ENST00000363418 128 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 SNORD114-15-201ENST00000364687 72 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 SNORA33.2-201ENST00000365413 134 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 MIR548H5-201ENST00000580314 60 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.33□□□□□ -2.46
SEMA3DO95025 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 AC098479.1-201ENST00000609225 154 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 U7.6-201ENST00000610841 64 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 uc_338.28-201ENST00000612082 187 ntBASIC-0.33□□□□□ -2.46
SEMA3DO95025 MIR101-1-201ENST00000362265 75 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 SNORD114-10-201ENST00000363409 72 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 SNORA25.7-201ENST00000364375 127 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 MIR106A-201ENST00000384870 81 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 SNORD41.1-201ENST00000391000 69 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 RNU6-493P-201ENST00000391321 108 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 SNORD57-201ENST00000448188 72 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 RNU6-635P-201ENST00000516651 102 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 RNU6-180P-201ENST00000516697 61 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 AL356055.1-201ENST00000602528 446 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 AL670379.3-201ENST00000605040 251 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 AC108676.2-201ENST00000605225 163 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 MIR548AZ-201ENST00000616567 95 ntBASIC-0.34□□□□□ -2.46
SEMA3DO95025 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 RNY4P3-201ENST00000365254 95 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 SNORD114-12-201ENST00000365400 75 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 RNU6-643P-201ENST00000384018 107 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 RNU6-429P-201ENST00000384582 108 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 MIR1302-6-201ENST00000408466 90 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 RNA5SP25-201ENST00000410815 110 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 SNORD4A-201ENST00000459174 72 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 MTATP8P1-201ENST00000467115 207 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 RNU2-35P-201ENST00000516446 142 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 RNU2-60P-201ENST00000517290 128 ntBASIC-0.35□□□□□ -2.47
SEMA3DO95025 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.36□□□□□ -2.47
SEMA3DO95025 RNU6-690P-201ENST00000365242 106 ntBASIC-0.36□□□□□ -2.47
SEMA3DO95025 RNU6-639P-201ENST00000384074 107 ntBASIC-0.36□□□□□ -2.47
SEMA3DO95025 MIR1270-201ENST00000459320 83 ntBASIC-0.36□□□□□ -2.47
SEMA3DO95025 TRAJ51-201ENST00000504127 63 ntBASIC-0.36□□□□□ -2.47
SEMA3DO95025 MIR8062-201ENST00000621515 85 ntBASIC-0.36□□□□□ -2.47
SEMA3DO95025 MIR6514-201ENST00000622549 70 ntBASIC-0.36□□□□□ -2.47
SEMA3DO95025 AC073869.9-201ENST00000641610 120 ntBASIC-0.36□□□□□ -2.47
SEMA3DO95025 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.37□□□□□ -2.47
SEMA3DO95025 MIR635-201ENST00000384830 98 ntBASIC-0.37□□□□□ -2.47
SEMA3DO95025 MIR599-201ENST00000385069 95 ntBASIC-0.37□□□□□ -2.47
SEMA3DO95025 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.37□□□□□ -2.47
SEMA3DO95025 HAR1A.1-201ENST00000459583 118 ntBASIC-0.37□□□□□ -2.47
SEMA3DO95025 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
SEMA3DO95025 NAMPTP3-201ENST00000569273 224 ntBASIC-0.37□□□□□ -2.47
SEMA3DO95025 MIR4500-201ENST00000579472 76 ntBASIC-0.37□□□□□ -2.47
SEMA3DO95025 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 RNU6-449P-201ENST00000383914 107 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 RNU6-472P-201ENST00000384299 107 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 SNORD110-201ENST00000408189 75 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 RNU4-63P-201ENST00000411313 118 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 AC006210.1-201ENST00000424882 111 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 RNA5SP236-201ENST00000516169 116 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.38□□□□□ -2.47
SEMA3DO95025 AP001328.1-201ENST00000528550 176 ntBASIC-0.38□□□□□ -2.47
SEMA3DO95025 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.39□□□□□ -2.47
SEMA3DO95025 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.39□□□□□ -2.47
SEMA3DO95025 SNORD49B-201ENST00000365172 72 ntBASIC-0.39□□□□□ -2.47
SEMA3DO95025 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.39□□□□□ -2.47
SEMA3DO95025 SNORA75.1-201ENST00000391130 148 ntBASIC-0.39□□□□□ -2.47
SEMA3DO95025 RNA5SP484-201ENST00000458857 111 ntBASIC-0.39□□□□□ -2.47
SEMA3DO95025 RNU7-10P-201ENST00000607194 63 ntBASIC-0.39□□□□□ -2.47
SEMA3DO95025 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.39□□□□□ -2.47
SEMA3DO95025 U6.104-201ENST00000637979 90 ntBASIC-0.39□□□□□ -2.47
SEMA3DO95025 RNU6-865P-201ENST00000364772 107 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 MIR196A2-201ENST00000385189 110 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 BX276092.1-201ENST00000427368 251 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 MTCYBP6-201ENST00000441810 138 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 AL117351.2-201ENST00000513571 157 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 MIR4308-201ENST00000580634 81 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 AC084368.1-201ENST00000620935 65 ntBASIC-0.4□□□□□ -2.47
SEMA3DO95025 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.41□□□□□ -2.48
SEMA3DO95025 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.41□□□□□ -2.48
SEMA3DO95025 RNY4P28-201ENST00000365281 93 ntBASIC-0.41□□□□□ -2.48
SEMA3DO95025 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.41□□□□□ -2.48
SEMA3DO95025 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.41□□□□□ -2.48
SEMA3DO95025 RNU6-240P-201ENST00000516098 97 ntBASIC-0.41□□□□□ -2.48
SEMA3DO95025 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.48
SEMA3DO95025 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.41□□□□□ -2.48
SEMA3DO95025 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.42□□□□□ -2.48
SEMA3DO95025 SNORA32.3-201ENST00000384772 121 ntBASIC-0.42□□□□□ -2.48
SEMA3DO95025 MIR206-201ENST00000384872 86 ntBASIC-0.42□□□□□ -2.48
SEMA3DO95025 AC097635.1-201ENST00000450678 155 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms