Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-785P-201ENST00000411324 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-250P-201ENST00000516958 103 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 MIR4484-201ENST00000582855 83 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 MIR4781-201ENST00000585250 76 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 GHRLOS.1-201ENST00000610995 70 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 U6.90-201ENST00000614007 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 U6.70-201ENST00000620287 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 MIR664A-201ENST00000626086 82 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PTCD1O75127 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
PTCD1O75127 SNORA25.3-201ENST00000363205 127 ntBASIC2.36□□□□□ -2.03
PTCD1O75127 SNORD38.2-201ENST00000384470 69 ntBASIC2.36□□□□□ -2.03
PTCD1O75127 MIR4796-201ENST00000580742 81 ntBASIC2.36□□□□□ -2.03
PTCD1O75127 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PTCD1O75127 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PTCD1O75127 RNU4-62P-201ENST00000410125 130 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 RNA5SP237-201ENST00000410414 113 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 SNRPGP12-201ENST00000449481 213 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 HSPE1P24-201ENST00000450782 238 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 RNU6-717P-201ENST00000459076 104 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 snoU13.11-201ENST00000459219 104 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 RNU6-557P-201ENST00000516842 110 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 snoU13.31-201ENST00000607291 104 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.35□□□□□ -2.03
PTCD1O75127 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PTCD1O75127 RNU6-686P-201ENST00000364839 107 ntBASIC2.34□□□□□ -2.03
PTCD1O75127 Y_RNA.386-201ENST00000383913 105 ntBASIC2.34□□□□□ -2.03
PTCD1O75127 SNORD90-201ENST00000391145 111 ntBASIC2.34□□□□□ -2.03
PTCD1O75127 snoU13.9-201ENST00000458927 103 ntBASIC2.34□□□□□ -2.03
PTCD1O75127 AC019176.1-201ENST00000518519 225 ntBASIC2.34□□□□□ -2.03
PTCD1O75127 AC138749.4-201ENST00000563970 127 ntBASIC2.34□□□□□ -2.03
PTCD1O75127 MIR8066-201ENST00000617280 78 ntBASIC2.34□□□□□ -2.03
PTCD1O75127 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
PTCD1O75127 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
PTCD1O75127 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
PTCD1O75127 RNU6-132P-201ENST00000383863 107 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 MIR635-201ENST00000384830 98 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 BX276092.1-201ENST00000427368 251 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 AC027119.1-201ENST00000440877 241 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 RPS27P21-201ENST00000486977 252 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 RNU1-40P-201ENST00000516816 164 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 RNU1-97P-201ENST00000516872 164 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 RNU6-850P-201ENST00000516934 103 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 MIR4303-201ENST00000581299 66 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 AC103810.8-201ENST00000607347 118 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 AL161722.3-201ENST00000605789 2983 ntBASIC2.33□□□□□ -2.04
PTCD1O75127 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PTCD1O75127 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PTCD1O75127 RNA5SP338-201ENST00000410495 85 ntBASIC2.32□□□□□ -2.04
PTCD1O75127 AC244023.1-201ENST00000426884 112 ntBASIC2.32□□□□□ -2.04
PTCD1O75127 AC023790.1-201ENST00000482174 347 ntBASIC2.32□□□□□ -2.04
PTCD1O75127 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.32□□□□□ -2.04
PTCD1O75127 AC242498.1-201ENST00000604134 111 ntBASIC2.32□□□□□ -2.04
PTCD1O75127 PRELID3BP2-201ENST00000605362 201 ntBASIC2.32□□□□□ -2.04
PTCD1O75127 AL662814.1-201ENST00000617364 121 ntBASIC2.32□□□□□ -2.04
PTCD1O75127 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PTCD1O75127 RNY1P2-201ENST00000364820 117 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 Y_RNA.340-201ENST00000365330 92 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 RNU6-411P-201ENST00000384451 107 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 MIR520H-201ENST00000385126 88 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 RNU6-75P-201ENST00000515944 104 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 RNU6-687P-201ENST00000516443 89 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 AC133485.1-201ENST00000567176 124 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 MIR4500-201ENST00000579472 76 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 AL512598.1-201ENST00000610158 273 ntBASIC2.31□□□□□ -2.04
PTCD1O75127 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PTCD1O75127 Y_RNA.226-201ENST00000364337 114 ntBASIC2.3□□□□□ -2.04
PTCD1O75127 MIR30A-201ENST00000385092 71 ntBASIC2.3□□□□□ -2.04
PTCD1O75127 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
PTCD1O75127 Y_RNA.648-201ENST00000459455 110 ntBASIC2.3□□□□□ -2.04
PTCD1O75127 SNORA44.1-201ENST00000517031 108 ntBASIC2.3□□□□□ -2.04
PTCD1O75127 RNU6-448P-201ENST00000517052 107 ntBASIC2.3□□□□□ -2.04
PTCD1O75127 AL049779.4-201ENST00000604500 156 ntBASIC2.3□□□□□ -2.04
PTCD1O75127 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
PTCD1O75127 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTCD1O75127 RNU6-396P-201ENST00000365369 105 ntBASIC2.29□□□□□ -2.04
PTCD1O75127 RNU6-949P-201ENST00000384040 107 ntBASIC2.29□□□□□ -2.04
PTCD1O75127 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.29□□□□□ -2.04
PTCD1O75127 AP1B1P2-201ENST00000416196 106 ntBASIC2.29□□□□□ -2.04
PTCD1O75127 AC079140.2-201ENST00000506193 142 ntBASIC2.29□□□□□ -2.04
PTCD1O75127 SNORA18.5-201ENST00000516616 101 ntBASIC2.29□□□□□ -2.04
PTCD1O75127 U6.109-201ENST00000636749 87 ntBASIC2.29□□□□□ -2.04
PTCD1O75127 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
PTCD1O75127 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
PTCD1O75127 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PTCD1O75127 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
PTCD1O75127 SNORA31.11-201ENST00000516528 139 ntBASIC2.28□□□□□ -2.04
PTCD1O75127 MIR3937-201ENST00000580135 106 ntBASIC2.28□□□□□ -2.04
PTCD1O75127 SNORD1A-201ENST00000364968 72 ntBASIC2.27□□□□□ -2.05
PTCD1O75127 RNU6-811P-201ENST00000384069 107 ntBASIC2.27□□□□□ -2.05
PTCD1O75127 MIR1302-7-201ENST00000408841 72 ntBASIC2.27□□□□□ -2.05
PTCD1O75127 MIR3064-201ENST00000581130 66 ntBASIC2.27□□□□□ -2.05
PTCD1O75127 AP000753.3-201ENST00000604083 169 ntBASIC2.27□□□□□ -2.05
PTCD1O75127 AL627230.6-201ENST00000611129 280 ntBASIC2.27□□□□□ -2.05
PTCD1O75127 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PTCD1O75127 SNORD36A-201ENST00000362874 73 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 SNORA16.1-201ENST00000364597 132 ntBASIC2.26□□□□□ -2.05
PTCD1O75127 MIR516A2-201ENST00000384888 90 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms