Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC023934.1-201ENST00000574529 2389 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 SNORD113.3-201ENST00000364630 78 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 RNU1-36P-201ENST00000365130 165 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 Y_RNA.388-201ENST00000383919 113 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 MIR583-201ENST00000384846 75 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 SNORA26.2-201ENST00000390922 122 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 SNORA40.18-201ENST00000391200 128 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 Y_RNA.588-201ENST00000391254 102 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 SNORA25.16-201ENST00000516741 121 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 AC023827.1-201ENST00000569247 97 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
NPHS1O60500 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
NPHS1O60500 Y_RNA.17-201ENST00000362433 111 ntBASIC1.57□□□□□ -2.16
NPHS1O60500 MIR181B2-201ENST00000385004 89 ntBASIC1.57□□□□□ -2.16
NPHS1O60500 RNU6-910P-201ENST00000390844 107 ntBASIC1.57□□□□□ -2.16
NPHS1O60500 Y_RNA.593-201ENST00000410292 98 ntBASIC1.57□□□□□ -2.16
NPHS1O60500 AC015818.7-201ENST00000428754 109 ntBASIC1.57□□□□□ -2.16
NPHS1O60500 AC087499.7-201ENST00000441958 109 ntBASIC1.57□□□□□ -2.16
NPHS1O60500 snoU13.15-201ENST00000459407 104 ntBASIC1.57□□□□□ -2.16
NPHS1O60500 SNORD116-10-201ENST00000363791 102 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 MIR504-201ENST00000385065 83 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 RNU4-83P-201ENST00000410863 133 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 AL591704.2-201ENST00000421658 181 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.56□□□□□ -2.16
NPHS1O60500 BX276092.1-201ENST00000427368 251 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 RNU7-185P-201ENST00000459215 60 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 RNU7-21P-201ENST00000459430 62 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 RNU6-531P-201ENST00000516694 104 ntBASIC1.56□□□□□ -2.16
NPHS1O60500 AC008163.1-202ENST00000636004 2889 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 RNU6-403P-201ENST00000363163 104 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 RNY1P10-201ENST00000363268 113 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 RNU6-934P-201ENST00000365154 107 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 SNORA72.6-201ENST00000384520 129 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 MIR450A2-201ENST00000385022 100 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 SNRPGP12-201ENST00000449481 213 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 MIR3124-201ENST00000582636 67 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 MIR7843-201ENST00000622274 79 ntBASIC1.55□□□□□ -2.16
NPHS1O60500 MIR494-201ENST00000349529 81 ntBASIC1.54□□□□□ -2.16
NPHS1O60500 SNORA80D-201ENST00000384488 135 ntBASIC1.54□□□□□ -2.16
NPHS1O60500 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.54□□□□□ -2.16
NPHS1O60500 RNU6-850P-201ENST00000516934 103 ntBASIC1.54□□□□□ -2.16
NPHS1O60500 AL513043.2-201ENST00000573941 143 ntBASIC1.54□□□□□ -2.16
NPHS1O60500 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
NPHS1O60500 AC106800.4-201ENST00000614905 153 ntBASIC1.54□□□□□ -2.16
NPHS1O60500 AC025521.1-201ENST00000621624 286 ntBASIC1.54□□□□□ -2.16
NPHS1O60500 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
NPHS1O60500 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NPHS1O60500 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
NPHS1O60500 SNORA26.9-201ENST00000391322 122 ntBASIC1.53□□□□□ -2.16
NPHS1O60500 MIR1257-201ENST00000408490 117 ntBASIC1.53□□□□□ -2.16
NPHS1O60500 SNORD79.1-201ENST00000516069 84 ntBASIC1.53□□□□□ -2.16
NPHS1O60500 MIR6845-201ENST00000613182 61 ntBASIC1.53□□□□□ -2.16
NPHS1O60500 RNU6-1125P-201ENST00000363601 107 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 RNU6-571P-201ENST00000384128 107 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 RNU6-480P-201ENST00000384332 107 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 SNORD111-201ENST00000408139 94 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 RNU6-402P-201ENST00000410678 103 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 RN7SKP12-201ENST00000516275 143 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 RNU7-40P-201ENST00000516397 64 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 RNU6-295P-201ENST00000516901 104 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 MIR4771-2-201ENST00000577758 74 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 MIR4771-1-201ENST00000582617 74 ntBASIC1.52□□□□□ -2.17
NPHS1O60500 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NPHS1O60500 Y_RNA.57-201ENST00000362806 113 ntBASIC1.51□□□□□ -2.17
NPHS1O60500 RNU4-58P-201ENST00000363192 141 ntBASIC1.51□□□□□ -2.17
NPHS1O60500 RNU6-53P-201ENST00000365367 106 ntBASIC1.51□□□□□ -2.17
NPHS1O60500 SNORD116-22-201ENST00000384430 92 ntBASIC1.51□□□□□ -2.17
NPHS1O60500 MIR1289-2-201ENST00000408360 111 ntBASIC1.51□□□□□ -2.17
NPHS1O60500 RNU6-267P-201ENST00000516714 103 ntBASIC1.51□□□□□ -2.17
NPHS1O60500 MIR8081-201ENST00000611533 95 ntBASIC1.51□□□□□ -2.17
NPHS1O60500 Y_RNA.13-201ENST00000362403 112 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 RNU6-820P-201ENST00000384273 107 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 RNU7-90P-201ENST00000459216 62 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 RNU6-548P-201ENST00000517083 115 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 MIR4668-201ENST00000582284 70 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 AC013244.2-201ENST00000603396 103 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.5□□□□□ -2.17
NPHS1O60500 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.5□□□□□ -2.17
NPHS1O60500 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NPHS1O60500 RNY1P1-201ENST00000364372 112 ntBASIC1.49□□□□□ -2.17
NPHS1O60500 RNY1P4-201ENST00000384595 115 ntBASIC1.49□□□□□ -2.17
NPHS1O60500 Y_RNA.609-201ENST00000410669 89 ntBASIC1.49□□□□□ -2.17
NPHS1O60500 RPS26P5-201ENST00000418544 335 ntBASIC1.49□□□□□ -2.17
NPHS1O60500 SNORA70.22-201ENST00000517160 124 ntBASIC1.49□□□□□ -2.17
NPHS1O60500 MIR8066-201ENST00000617280 78 ntBASIC1.49□□□□□ -2.17
NPHS1O60500 RNU6-219P-201ENST00000364728 107 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 RNA5SP173-201ENST00000364857 136 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NPHS1O60500 RNU6-675P-201ENST00000384236 104 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 MIR125B2-201ENST00000385128 89 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 AC108210.2-201ENST00000503681 201 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 MIR4524B-201ENST00000581569 115 ntBASIC1.48□□□□□ -2.17
NPHS1O60500 MIR6082-201ENST00000613604 109 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 277.4 ms