Protein–RNA interactions for Protein: O15049

N4BP3, NEDD4-binding protein 3, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
N4BP3O15049 MIR4299-201ENST00000577899 72 ntBASIC1.92□□□□□ -2.1
N4BP3O15049 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.92□□□□□ -2.1
N4BP3O15049 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
N4BP3O15049 HSBP1P2-201ENST00000299671 229 ntBASIC1.91□□□□□ -2.1
N4BP3O15049 RNA5SP259-201ENST00000365541 109 ntBASIC1.91□□□□□ -2.1
N4BP3O15049 MIR889-201ENST00000401280 79 ntBASIC1.91□□□□□ -2.1
N4BP3O15049 AC093729.1-201ENST00000513074 128 ntBASIC1.91□□□□□ -2.1
N4BP3O15049 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
N4BP3O15049 PRELID3BP2-201ENST00000605362 201 ntBASIC1.91□□□□□ -2.1
N4BP3O15049 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
N4BP3O15049 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.91□□□□□ -2.1
N4BP3O15049 Y_RNA.168-201ENST00000363740 102 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 RNY1P2-201ENST00000364820 117 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 RNU6-949P-201ENST00000384040 107 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
N4BP3O15049 AC087499.7-201ENST00000441958 109 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 AC245517.4-201ENST00000448601 281 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 SNORD111.1-201ENST00000516421 86 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 MIR4255-201ENST00000579351 72 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 AC090897.1-201ENST00000580909 226 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 MIR3192-201ENST00000584920 77 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 snoU13.31-201ENST00000607291 104 ntBASIC1.9□□□□□ -2.11
N4BP3O15049 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
N4BP3O15049 MIR378A-201ENST00000362177 66 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 RNA5SP133-201ENST00000363368 119 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 MIR513A1-201ENST00000385138 129 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 SNORD41-201ENST00000386967 70 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 RNU6-519P-201ENST00000410590 108 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 snoU13.2-201ENST00000459201 104 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 RNU7-153P-201ENST00000516455 62 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 RNU6-922P-201ENST00000516753 99 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 MIR4712-201ENST00000583750 82 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 MIR502-201ENST00000606349 86 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 MIR8074-201ENST00000615081 81 ntBASIC1.89□□□□□ -2.11
N4BP3O15049 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
N4BP3O15049 RNA5SP190-201ENST00000365222 118 ntBASIC1.88□□□□□ -2.11
N4BP3O15049 MIR588-201ENST00000384900 83 ntBASIC1.88□□□□□ -2.11
N4BP3O15049 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
N4BP3O15049 RNU4-83P-201ENST00000410863 133 ntBASIC1.88□□□□□ -2.11
N4BP3O15049 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
N4BP3O15049 AC138749.4-201ENST00000563970 127 ntBASIC1.88□□□□□ -2.11
N4BP3O15049 MIR4500-201ENST00000579472 76 ntBASIC1.88□□□□□ -2.11
N4BP3O15049 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
N4BP3O15049 SNORD115-37-201ENST00000363768 82 ntBASIC1.87□□□□□ -2.11
N4BP3O15049 RNA5SP48-201ENST00000363969 126 ntBASIC1.87□□□□□ -2.11
N4BP3O15049 RNU6-439P-201ENST00000384188 106 ntBASIC1.87□□□□□ -2.11
N4BP3O15049 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
N4BP3O15049 MIR1302-7-201ENST00000408841 72 ntBASIC1.87□□□□□ -2.11
N4BP3O15049 AC140658.3-201ENST00000567603 271 ntBASIC1.87□□□□□ -2.11
N4BP3O15049 AL096861.1-201ENST00000610899 123 ntBASIC1.87□□□□□ -2.11
N4BP3O15049 MIR8066-201ENST00000617280 78 ntBASIC1.87□□□□□ -2.11
N4BP3O15049 SNORA25.3-201ENST00000363205 127 ntBASIC1.86□□□□□ -2.11
N4BP3O15049 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
N4BP3O15049 RNU6-321P-201ENST00000410912 106 ntBASIC1.86□□□□□ -2.11
N4BP3O15049 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
N4BP3O15049 AP000753.3-201ENST00000604083 169 ntBASIC1.86□□□□□ -2.11
N4BP3O15049 U6.109-201ENST00000636749 87 ntBASIC1.86□□□□□ -2.11
N4BP3O15049 WWP1P1-201ENST00000466609 2769 ntBASIC1.86□□□□□ -2.11
N4BP3O15049 Y_RNA.57-201ENST00000362806 113 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 RNU4-32P-201ENST00000363404 141 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 RNA5SP363-201ENST00000365072 115 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 MIR499A-201ENST00000384903 122 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 MIR563-201ENST00000385080 79 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 SNRPGP12-201ENST00000449481 213 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 SNORD4B-201ENST00000459083 72 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 RNU6-850P-201ENST00000516934 103 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 SNORA77B-201ENST00000578179 125 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
N4BP3O15049 MIR8070-201ENST00000616510 88 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 MIR6740-201ENST00000618268 113 ntBASIC1.85□□□□□ -2.11
N4BP3O15049 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
N4BP3O15049 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
N4BP3O15049 BX276092.1-201ENST00000427368 251 ntBASIC1.84□□□□□ -2.11
N4BP3O15049 AC073261.1-201ENST00000429409 121 ntBASIC1.84□□□□□ -2.11
N4BP3O15049 AC015688.6-201ENST00000577737 104 ntBASIC1.84□□□□□ -2.11
N4BP3O15049 AL357312.1-201ENST00000603879 298 ntBASIC1.84□□□□□ -2.11
N4BP3O15049 Y_RNA.119-201ENST00000363301 96 ntBASIC1.83□□□□□ -2.12
N4BP3O15049 RNU6-396P-201ENST00000365369 105 ntBASIC1.83□□□□□ -2.12
N4BP3O15049 MIR489-201ENST00000384923 84 ntBASIC1.83□□□□□ -2.12
N4BP3O15049 MIR1236-201ENST00000408340 102 ntBASIC1.83□□□□□ -2.12
N4BP3O15049 RNU7-85P-201ENST00000458851 63 ntBASIC1.83□□□□□ -2.12
N4BP3O15049 SNORA25.13-201ENST00000516395 103 ntBASIC1.83□□□□□ -2.12
N4BP3O15049 SNORA4-201ENST00000584302 138 ntBASIC1.83□□□□□ -2.12
N4BP3O15049 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
N4BP3O15049 MIR30D-201ENST00000362283 70 ntBASIC1.82□□□□□ -2.12
N4BP3O15049 SNORD33-201ENST00000362761 85 ntBASIC1.82□□□□□ -2.12
N4BP3O15049 RNU6-205P-201ENST00000390858 107 ntBASIC1.82□□□□□ -2.12
N4BP3O15049 snoU13.25-201ENST00000458945 104 ntBASIC1.82□□□□□ -2.12
N4BP3O15049 TRMT112P2-201ENST00000512910 132 ntBASIC1.82□□□□□ -2.12
N4BP3O15049 SNORA25.9-201ENST00000365087 128 ntBASIC1.81□□□□□ -2.12
N4BP3O15049 MIR30A-201ENST00000385092 71 ntBASIC1.81□□□□□ -2.12
N4BP3O15049 RNU6-1165P-201ENST00000410119 107 ntBASIC1.81□□□□□ -2.12
N4BP3O15049 AC023790.1-201ENST00000482174 347 ntBASIC1.81□□□□□ -2.12
N4BP3O15049 RNU6-947P-201ENST00000516264 106 ntBASIC1.81□□□□□ -2.12
N4BP3O15049 uc_338.6-201ENST00000613544 171 ntBASIC1.81□□□□□ -2.12
N4BP3O15049 RNU6-478P-201ENST00000363904 110 ntBASIC1.8□□□□□ -2.12
N4BP3O15049 RNU6-1229P-201ENST00000364295 107 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms