Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC006504.6-201ENST00000590142 199 ntBASIC-0.15□□□□□ -2.43
CUX2O14529 SNORD115-2-201ENST00000362842 82 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 SNORD115-20-201ENST00000365099 82 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 AC138869.1-201ENST00000568623 124 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 MIR4752-201ENST00000579672 72 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 U6.109-201ENST00000636749 87 ntBASIC-0.16□□□□□ -2.43
CUX2O14529 SNORD114-5-201ENST00000362928 70 ntBASIC-0.16□□□□□ -2.44
CUX2O14529 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.16□□□□□ -2.44
CUX2O14529 RNY4P28-201ENST00000365281 93 ntBASIC-0.16□□□□□ -2.44
CUX2O14529 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.16□□□□□ -2.44
CUX2O14529 RNA5SP144-201ENST00000410846 116 ntBASIC-0.16□□□□□ -2.44
CUX2O14529 MTND1P19-201ENST00000511780 315 ntBASIC-0.16□□□□□ -2.44
CUX2O14529 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.16□□□□□ -2.44
CUX2O14529 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.16□□□□□ -2.44
CUX2O14529 SNORA63.5-201ENST00000363548 123 ntBASIC-0.17□□□□□ -2.44
CUX2O14529 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.17□□□□□ -2.44
CUX2O14529 SNORA32-201ENST00000384072 121 ntBASIC-0.17□□□□□ -2.44
CUX2O14529 MT-TQ-201ENST00000387372 72 ntBASIC-0.17□□□□□ -2.44
CUX2O14529 RNU6-782P-201ENST00000516852 104 ntBASIC-0.17□□□□□ -2.44
CUX2O14529 MIR4743-201ENST00000584576 69 ntBASIC-0.17□□□□□ -2.44
CUX2O14529 SNORD114-10-201ENST00000363409 72 ntBASIC-0.18□□□□□ -2.44
CUX2O14529 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
CUX2O14529 RNU6-643P-201ENST00000384018 107 ntBASIC-0.18□□□□□ -2.44
CUX2O14529 RNU6-429P-201ENST00000384582 108 ntBASIC-0.18□□□□□ -2.44
CUX2O14529 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.18□□□□□ -2.44
CUX2O14529 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.18□□□□□ -2.44
CUX2O14529 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.18□□□□□ -2.44
CUX2O14529 MIR548H5-201ENST00000580314 60 ntBASIC-0.18□□□□□ -2.44
CUX2O14529 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
CUX2O14529 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.19□□□□□ -2.44
CUX2O14529 RNU6-726P-201ENST00000364680 107 ntBASIC-0.19□□□□□ -2.44
CUX2O14529 MIR635-201ENST00000384830 98 ntBASIC-0.19□□□□□ -2.44
CUX2O14529 SNORD127-201ENST00000458892 86 ntBASIC-0.19□□□□□ -2.44
CUX2O14529 AC138749.4-201ENST00000563970 127 ntBASIC-0.19□□□□□ -2.44
CUX2O14529 AC011921.3-201ENST00000605540 361 ntBASIC-0.19□□□□□ -2.44
CUX2O14529 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.2□□□□□ -2.44
CUX2O14529 RNU6-702P-201ENST00000364982 107 ntBASIC-0.2□□□□□ -2.44
CUX2O14529 RNU6-690P-201ENST00000365242 106 ntBASIC-0.2□□□□□ -2.44
CUX2O14529 MIR4500-201ENST00000579472 76 ntBASIC-0.2□□□□□ -2.44
CUX2O14529 AC008737.2-201ENST00000599446 118 ntBASIC-0.2□□□□□ -2.44
CUX2O14529 RNU7-10P-201ENST00000607194 63 ntBASIC-0.2□□□□□ -2.44
CUX2O14529 U7.6-201ENST00000610841 64 ntBASIC-0.2□□□□□ -2.44
CUX2O14529 RNU6-472P-201ENST00000384299 107 ntBASIC-0.21□□□□□ -2.44
CUX2O14529 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.21□□□□□ -2.44
CUX2O14529 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.21□□□□□ -2.44
CUX2O14529 SNORD67.1-201ENST00000516618 108 ntBASIC-0.21□□□□□ -2.44
CUX2O14529 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.21□□□□□ -2.44
CUX2O14529 AC105081.1-201ENST00000617727 106 ntBASIC-0.21□□□□□ -2.44
CUX2O14529 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.22□□□□□ -2.44
CUX2O14529 MIR548H3-201ENST00000408771 118 ntBASIC-0.22□□□□□ -2.44
CUX2O14529 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.22□□□□□ -2.44
CUX2O14529 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.22□□□□□ -2.45
CUX2O14529 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.22□□□□□ -2.45
CUX2O14529 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.22□□□□□ -2.45
CUX2O14529 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.22□□□□□ -2.45
CUX2O14529 AC244505.6-201ENST00000452829 130 ntBASIC-0.22□□□□□ -2.45
CUX2O14529 SNORD27-201ENST00000363981 72 ntBASIC-0.23□□□□□ -2.45
CUX2O14529 RNY1P2-201ENST00000364820 117 ntBASIC-0.23□□□□□ -2.45
CUX2O14529 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.23□□□□□ -2.45
CUX2O14529 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.23□□□□□ -2.45
CUX2O14529 AC011603.4-201ENST00000611325 277 ntBASIC-0.23□□□□□ -2.45
CUX2O14529 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.24□□□□□ -2.45
CUX2O14529 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.24□□□□□ -2.45
CUX2O14529 SNORD18B-201ENST00000365659 72 ntBASIC-0.24□□□□□ -2.45
CUX2O14529 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.24□□□□□ -2.45
CUX2O14529 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.24□□□□□ -2.45
CUX2O14529 RNU7-137P-201ENST00000516788 62 ntBASIC-0.24□□□□□ -2.45
CUX2O14529 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.24□□□□□ -2.45
CUX2O14529 MIR606-201ENST00000384851 96 ntBASIC-0.25□□□□□ -2.45
CUX2O14529 RNU2-38P-201ENST00000410856 79 ntBASIC-0.25□□□□□ -2.45
CUX2O14529 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.25□□□□□ -2.45
CUX2O14529 MTATP6P21-201ENST00000440681 189 ntBASIC-0.25□□□□□ -2.45
CUX2O14529 AC098479.1-201ENST00000609225 154 ntBASIC-0.25□□□□□ -2.45
CUX2O14529 AL162376.1-201ENST00000624117 175 ntBASIC-0.25□□□□□ -2.45
CUX2O14529 U6.106-201ENST00000636360 105 ntBASIC-0.25□□□□□ -2.45
CUX2O14529 RNU6-275P-201ENST00000364910 107 ntBASIC-0.26□□□□□ -2.45
CUX2O14529 RNU7-159P-201ENST00000459284 62 ntBASIC-0.26□□□□□ -2.45
CUX2O14529 AC138907.4-201ENST00000570107 226 ntBASIC-0.26□□□□□ -2.45
CUX2O14529 MIR548AE2-201ENST00000583456 67 ntBASIC-0.26□□□□□ -2.45
CUX2O14529 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.27□□□□□ -2.45
CUX2O14529 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.27□□□□□ -2.45
CUX2O14529 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.27□□□□□ -2.45
CUX2O14529 RNU6-818P-201ENST00000364837 108 ntBASIC-0.27□□□□□ -2.45
CUX2O14529 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.27□□□□□ -2.45
CUX2O14529 RNU7-161P-201ENST00000517289 62 ntBASIC-0.27□□□□□ -2.45
CUX2O14529 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CUX2O14529 MIR4308-201ENST00000580634 81 ntBASIC-0.27□□□□□ -2.45
CUX2O14529 MIR6844-201ENST00000637122 62 ntBASIC-0.27□□□□□ -2.45
CUX2O14529 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.28□□□□□ -2.45
CUX2O14529 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.28□□□□□ -2.45
CUX2O14529 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.28□□□□□ -2.45
CUX2O14529 SNORD114-3-201ENST00000364969 75 ntBASIC-0.28□□□□□ -2.45
CUX2O14529 RNU6-929P-201ENST00000384429 107 ntBASIC-0.28□□□□□ -2.45
CUX2O14529 RNU6-269P-201ENST00000391077 97 ntBASIC-0.28□□□□□ -2.45
CUX2O14529 MTND2P23-201ENST00000422990 651 ntBASIC-0.28□□□□□ -2.45
CUX2O14529 RNU7-104P-201ENST00000459398 79 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms