Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 MIR1302-7-201ENST00000408841 72 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 RNA5SP237-201ENST00000410414 113 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 BX276092.1-201ENST00000427368 251 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 snoU13.11-201ENST00000459219 104 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 AC133485.1-201ENST00000567176 124 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 MIR3192-201ENST00000584920 77 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 U6.109-201ENST00000636749 87 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 SNORA3A-201ENST00000364113 130 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 Y_RNA.532-201ENST00000384590 113 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 SNORD38B-201ENST00000384690 67 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 RNA5SP292-201ENST00000390974 118 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 AC023790.1-201ENST00000482174 347 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 SNORD111.1-201ENST00000516421 86 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 RNU6-850P-201ENST00000516934 103 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 MIR4500-201ENST00000579472 76 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
RFXAPO00287 PRELID3BP2-201ENST00000605362 201 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 MIR6504-201ENST00000613520 61 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 MIR6740-201ENST00000618268 113 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 SNORD38B-202ENST00000625943 69 ntBASIC1.93□□□□□ -2.1
RFXAPO00287 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RFXAPO00287 RNU6-315P-201ENST00000362666 107 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 SNORA25.3-201ENST00000363205 127 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 RNY1P2-201ENST00000364820 117 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 RNU6-949P-201ENST00000384040 107 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 MIR194-1-201ENST00000384892 85 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 SNORD41-201ENST00000386967 70 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 SNORA67.5-201ENST00000391036 107 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 snoU13.25-201ENST00000458945 104 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 AL512598.1-201ENST00000610158 273 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.92□□□□□ -2.1
RFXAPO00287 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RFXAPO00287 MIR1236-201ENST00000408340 102 ntBASIC1.91□□□□□ -2.1
RFXAPO00287 AC004965.1-201ENST00000413033 213 ntBASIC1.91□□□□□ -2.1
RFXAPO00287 MIR3134-201ENST00000579433 74 ntBASIC1.91□□□□□ -2.1
RFXAPO00287 AL096861.1-201ENST00000610899 123 ntBASIC1.91□□□□□ -2.1
RFXAPO00287 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
RFXAPO00287 RNU6-624P-201ENST00000363411 107 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 MIR588-201ENST00000384900 83 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 MIR653-201ENST00000385279 96 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 SNORD90-201ENST00000391145 111 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.9□□□□□ -2.11
RFXAPO00287 snoU13.2-201ENST00000459201 104 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 RNU6-1108P-201ENST00000516308 104 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 RNU6-922P-201ENST00000516753 99 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 U7.4-201ENST00000614961 63 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 MIR8066-201ENST00000617280 78 ntBASIC1.9□□□□□ -2.11
RFXAPO00287 RNU6-1123P-201ENST00000362347 106 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 RNU6-161P-201ENST00000363051 106 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 RNU6-132P-201ENST00000383863 107 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 SNORA6-201ENST00000384033 151 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 RNU6-205P-201ENST00000390858 107 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 RNU7-193P-201ENST00000516723 65 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.89□□□□□ -2.11
RFXAPO00287 MIR4796-201ENST00000580742 81 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 AL645939.4-201ENST00000604495 135 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 MIR502-201ENST00000606349 86 ntBASIC1.89□□□□□ -2.11
RFXAPO00287 AC008163.1-202ENST00000636004 2889 ntBASIC1.88□□□□□ -2.11
RFXAPO00287 MIR30D-201ENST00000362283 70 ntBASIC1.88□□□□□ -2.11
RFXAPO00287 MIR563-201ENST00000385080 79 ntBASIC1.88□□□□□ -2.11
RFXAPO00287 SNORA31.25-201ENST00000517242 134 ntBASIC1.88□□□□□ -2.11
RFXAPO00287 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
RFXAPO00287 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFXAPO00287 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
RFXAPO00287 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFXAPO00287 MIRLET7A1-201ENST00000362295 80 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 SNORA63.2-201ENST00000362603 126 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 Y_RNA.119-201ENST00000363301 96 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 Y_RNA.540-201ENST00000384638 111 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 Y_RNA.545-201ENST00000384652 105 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 MIR516A2-201ENST00000384888 90 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 MIR516A1-201ENST00000385033 90 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 AL161935.2-201ENST00000414627 60 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 Y_RNA.648-201ENST00000459455 110 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 RNU6-75P-201ENST00000515944 104 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 MIR4484-201ENST00000582855 83 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 AP000753.3-201ENST00000604083 169 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
RFXAPO00287 RNU1-42P-201ENST00000364033 160 ntBASIC1.86□□□□□ -2.11
RFXAPO00287 RNA5SP259-201ENST00000365541 109 ntBASIC1.86□□□□□ -2.11
RFXAPO00287 RNU6-392P-201ENST00000364926 101 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 MIR635-201ENST00000384830 98 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 MIR513A1-201ENST00000385138 129 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 MIR524-201ENST00000385242 87 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 RNU6-360P-201ENST00000390944 104 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 RNA5SP95-201ENST00000410319 137 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 AC114801.3-201ENST00000510231 177 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 MIR4452-201ENST00000583004 71 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 MIR664A-201ENST00000626086 82 ntBASIC1.85□□□□□ -2.11
RFXAPO00287 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RFXAPO00287 AL359851.1-201ENST00000569460 4997 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms