Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SNORA67.4-201ENST00000384688 142 ntBASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 MIR196B-201ENST00000384852 84 ntBASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 MIR512-1-201ENST00000384913 84 ntBASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 MT-TN-201ENST00000387400 73 ntBASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 SUMO1P4-201ENST00000429430 302 ntBASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 RNU7-195P-201ENST00000458793 62 ntBASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 Y_RNA.239-201ENST00000364444 113 ntBASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 RNA5SP126-201ENST00000365092 109 ntBASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 RNY4P3-201ENST00000365254 95 ntBASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 Y_RNA.588-201ENST00000391254 102 ntBASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 AL606490.4-201ENST00000423117 127 ntBASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 TRAJ51-201ENST00000504127 63 ntBASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 TRDV1-202ENST00000621643 102 ntBASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHB3Q9Y5E6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 SNORA25.4-201ENST00000363666 124 ntBASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 RNA5SP259-201ENST00000365541 109 ntBASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 RNU6-895P-201ENST00000384125 103 ntBASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 SNORD100-201ENST00000408573 76 ntBASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 RPS27P16-201ENST00000425758 201 ntBASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 RPL30P7-201ENST00000479312 323 ntBASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 RNU6-922P-201ENST00000516753 99 ntBASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 MIR3675-201ENST00000583661 73 ntBASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDHB3Q9Y5E6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 RNU6-681P-201ENST00000364012 104 ntBASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 Y_RNA.443-201ENST00000384135 111 ntBASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 SNORD45A-201ENST00000384512 84 ntBASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 MIR2113-201ENST00000459007 91 ntBASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 MIR2115-201ENST00000516657 100 ntBASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 RNU2-19P-201ENST00000517288 84 ntBASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 MIR3140-201ENST00000583685 90 ntBASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHB3Q9Y5E6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
PCDHB3Q9Y5E6 AC062016.1-201ENST00000355719 319 ntBASIC2.71□□□□□ -1.98
PCDHB3Q9Y5E6 MIR337-201ENST00000362281 93 ntBASIC2.71□□□□□ -1.98
PCDHB3Q9Y5E6 Y_RNA.536-201ENST00000384621 113 ntBASIC2.71□□□□□ -1.98
PCDHB3Q9Y5E6 MIR513A1-201ENST00000385138 129 ntBASIC2.71□□□□□ -1.98
PCDHB3Q9Y5E6 MIR519A1-201ENST00000385257 85 ntBASIC2.71□□□□□ -1.98
PCDHB3Q9Y5E6 Y_RNA.606-201ENST00000410579 103 ntBASIC2.71□□□□□ -1.98
PCDHB3Q9Y5E6 AC092628.1-201ENST00000436250 252 ntBASIC2.71□□□□□ -1.98
PCDHB3Q9Y5E6 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
PCDHB3Q9Y5E6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 SNORD93-201ENST00000408813 74 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 RNA5SP450-201ENST00000411206 102 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 RNA5SP508-201ENST00000411327 119 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 AL161935.2-201ENST00000414627 60 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 RN7SL274P-201ENST00000492268 272 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 AC079600.2-201ENST00000550076 130 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 MIR5194-201ENST00000582634 120 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 MIR3124-201ENST00000582636 67 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 AL627230.6-201ENST00000611129 280 ntBASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PCDHB3Q9Y5E6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 RNU6-664P-201ENST00000362381 107 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 RNU1-52P-201ENST00000384190 164 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 RNA5SP270-201ENST00000411361 118 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 snoU13.25-201ENST00000458945 104 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 SNORD109B-201ENST00000458961 67 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 SNORD109A-201ENST00000459128 67 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 Y_RNA.809-201ENST00000516058 95 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 MIR4696-201ENST00000581431 70 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.69□□□□□ -1.98
PCDHB3Q9Y5E6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 MIR101-2-201ENST00000362195 79 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 RNA5SP393-201ENST00000363423 117 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 SNORD101-201ENST00000384027 73 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 MIR9-1-201ENST00000385198 89 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 RNU6-881P-201ENST00000516813 102 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 MIR5089-201ENST00000580047 84 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 MIR6516-201ENST00000630554 81 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 U6.100-201ENST00000636230 99 ntBASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
PCDHB3Q9Y5E6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 MIR377-201ENST00000362145 69 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 RNU6-1260P-201ENST00000362944 107 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 RNU6-403P-201ENST00000363163 104 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 RNU1-36P-201ENST00000365130 165 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 MIR524-201ENST00000385242 87 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 MIR548H5-201ENST00000580314 60 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 AC104984.5-201ENST00000586878 94 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 RNU7-10P-201ENST00000607194 63 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 MIR8053-201ENST00000613344 75 ntBASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PCDHB3Q9Y5E6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 MIR26A1-201ENST00000362205 77 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 RNU6-859P-201ENST00000362728 107 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 SNORD115-22-201ENST00000364456 82 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 SNORA67.1-201ENST00000364749 141 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 AC097510.1-201ENST00000510945 133 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms