Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RPL39P25-201ENST00000449384 154 ntBASIC0.78□□□□□ -2.28
LSM4Q9Y4Z0 SNORD92-201ENST00000585078 85 ntBASIC0.78□□□□□ -2.28
LSM4Q9Y4Z0 AC108081.1-201ENST00000604358 221 ntBASIC0.78□□□□□ -2.28
LSM4Q9Y4Z0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
LSM4Q9Y4Z0 RNU6-364P-201ENST00000384387 107 ntBASIC0.77□□□□□ -2.29
LSM4Q9Y4Z0 Y_RNA.506-201ENST00000384494 102 ntBASIC0.77□□□□□ -2.29
LSM4Q9Y4Z0 RNU1-119P-201ENST00000391122 165 ntBASIC0.77□□□□□ -2.29
LSM4Q9Y4Z0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.77□□□□□ -2.29
LSM4Q9Y4Z0 RNU7-123P-201ENST00000515911 60 ntBASIC0.77□□□□□ -2.29
LSM4Q9Y4Z0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 Y_RNA.114-201ENST00000363265 113 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 Y_RNA.343-201ENST00000365354 112 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 MT-TR-201ENST00000387439 65 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 MIR548AE2-201ENST00000583456 67 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 U7.2-201ENST00000607576 63 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 MIR6857-201ENST00000613267 93 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 MIR6779-201ENST00000617283 64 ntBASIC0.76□□□□□ -2.29
LSM4Q9Y4Z0 RNU6-647P-201ENST00000364243 107 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 MIR573-201ENST00000384964 99 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 RNU4-69P-201ENST00000410677 143 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 RNU7-102P-201ENST00000458948 62 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 RNU6-426P-201ENST00000516464 97 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 AC011195.1-201ENST00000578177 177 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
LSM4Q9Y4Z0 Y_RNA.280-201ENST00000364765 112 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 SNORA32-201ENST00000384072 121 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 MIR532-201ENST00000385025 91 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 RNU4-83P-201ENST00000410863 133 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 AC096949.1-201ENST00000412047 152 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 AL158147.1-201ENST00000443970 75 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 RNA5SP436-201ENST00000516020 115 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 AC090897.1-201ENST00000580909 226 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 TUG1_4.1-201ENST00000619464 181 ntBASIC0.74□□□□□ -2.29
LSM4Q9Y4Z0 Y_RNA.568-201ENST00000384742 113 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 Y_RNA.588-201ENST00000391254 102 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 RN7SKP19-201ENST00000516016 252 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 RNA5SP272-201ENST00000516095 111 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 RNU6-346P-201ENST00000516288 111 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 RNY4P20-201ENST00000516678 93 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 MIR4491-201ENST00000581087 68 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 AC008608.1-201ENST00000603910 127 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 MIR8066-201ENST00000617280 78 ntBASIC0.73□□□□□ -2.29
LSM4Q9Y4Z0 AL589743.1-201ENST00000551932 2712 ntBASIC0.72□□□□□ -2.29
LSM4Q9Y4Z0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.72□□□□□ -2.29
LSM4Q9Y4Z0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 SNORD114-10-201ENST00000363409 72 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 RNU6-1062P-201ENST00000383908 107 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 RNU6-1104P-201ENST00000384723 104 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 SNORA40-201ENST00000388090 126 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 SNORD100-201ENST00000408573 76 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 MTND4LP9-201ENST00000427694 174 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 IGKV1-22-201ENST00000524313 326 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 MIR6082-201ENST00000613604 109 ntBASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.71□□□□□ -2.3
LSM4Q9Y4Z0 RNU6-403P-201ENST00000363163 104 ntBASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 RNA5SP325-201ENST00000363756 130 ntBASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 Y_RNA.294-201ENST00000364916 102 ntBASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 RNU4-45P-201ENST00000365469 141 ntBASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 Y_RNA.617-201ENST00000410920 90 ntBASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 RNU7-137P-201ENST00000516788 62 ntBASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 RNU6-765P-201ENST00000516916 99 ntBASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 RNU6-448P-201ENST00000517052 107 ntBASIC0.7□□□□□ -2.3
LSM4Q9Y4Z0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 SNORD77B-201ENST00000391112 67 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 RNA5SP136-201ENST00000410906 107 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 MIR1270-201ENST00000459320 83 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 AC002350.1-201ENST00000490759 375 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 SNORD67.1-201ENST00000516618 108 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 AC022523.2-201ENST00000561045 150 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 MIR3612-201ENST00000579753 87 ntBASIC0.69□□□□□ -2.3
LSM4Q9Y4Z0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 RNU6-257P-201ENST00000410238 98 ntBASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 AP003327.1-201ENST00000529684 127 ntBASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 AC013244.2-201ENST00000603396 103 ntBASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
LSM4Q9Y4Z0 MIR18A-201ENST00000362310 71 ntBASIC0.67□□□□□ -2.3
LSM4Q9Y4Z0 SNORD114-2-201ENST00000363953 78 ntBASIC0.67□□□□□ -2.3
LSM4Q9Y4Z0 RN7SL793P-201ENST00000583259 296 ntBASIC0.67□□□□□ -2.3
LSM4Q9Y4Z0 AL359881.1-201ENST00000602916 267 ntBASIC0.67□□□□□ -2.3
LSM4Q9Y4Z0 FAM71BP1-201ENST00000604431 523 ntBASIC0.67□□□□□ -2.3
LSM4Q9Y4Z0 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
LSM4Q9Y4Z0 Y_RNA.198-201ENST00000364013 98 ntBASIC0.66□□□□□ -2.3
LSM4Q9Y4Z0 RNA5SP117-201ENST00000365294 118 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms