Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RNU6-1217P-201ENST00000411276 104 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-785P-201ENST00000411324 104 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 AC025033.1-201ENST00000463883 194 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 AC004223.1-201ENST00000479840 271 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 MIR548AO-201ENST00000579992 96 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 AL627230.6-201ENST00000611129 280 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 U6.90-201ENST00000614007 104 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 U6.70-201ENST00000620287 104 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 Y_RNA.788-201ENST00000622394 112 ntBASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
LEMD3Q9Y2U8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 RNA5SP133-201ENST00000363368 119 ntBASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 Y_RNA.354-201ENST00000365448 111 ntBASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-523P-201ENST00000516304 54 ntBASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 SNORA25.13-201ENST00000516395 103 ntBASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 AP000942.3-201ENST00000603702 160 ntBASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 AC008133.2-201ENST00000624540 351 ntBASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 AP001362.1-201ENST00000625165 124 ntBASIC2.32□□□□□ -2.04
LEMD3Q9Y2U8 MIR424-201ENST00000362227 98 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-315P-201ENST00000362666 107 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 Y_RNA.57-201ENST00000362806 113 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 SNORD115-37-201ENST00000363768 82 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-480P-201ENST00000384332 107 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-519P-201ENST00000410590 108 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 AL450471.1-201ENST00000447509 127 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 SNORA44.1-201ENST00000517031 108 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 MIR4764-201ENST00000580680 88 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 U7.4-201ENST00000614961 63 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LEMD3Q9Y2U8 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 SNORD38.2-201ENST00000384470 69 ntBASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-129P-201ENST00000391022 107 ntBASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 AC003989.2-201ENST00000440224 169 ntBASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 JTBP1-201ENST00000441314 247 ntBASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 MIR7111-201ENST00000619751 72 ntBASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.3□□□□□ -2.04
LEMD3Q9Y2U8 Y_RNA.168-201ENST00000363740 102 ntBASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 RNU4-83P-201ENST00000410863 133 ntBASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-717P-201ENST00000459076 104 ntBASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 SNORD4B-201ENST00000459083 72 ntBASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-917P-201ENST00000516294 104 ntBASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 CYP3A52P-201ENST00000563326 91 ntBASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.29□□□□□ -2.04
LEMD3Q9Y2U8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 HSBP1P2-201ENST00000299671 229 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 RNU4-32P-201ENST00000363404 141 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 MIR9-3-201ENST00000385084 90 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 RNA5SP445-201ENST00000515889 115 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 RNU7-43P-201ENST00000516554 64 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 RNU1-40P-201ENST00000516816 164 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 RNU1-97P-201ENST00000516872 164 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 AC141846.1-201ENST00000568348 142 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
LEMD3Q9Y2U8 RNU6-624P-201ENST00000363411 107 ntBASIC2.27□□□□□ -2.05
LEMD3Q9Y2U8 Y_RNA.545-201ENST00000384652 105 ntBASIC2.27□□□□□ -2.05
LEMD3Q9Y2U8 MIR1236-201ENST00000408340 102 ntBASIC2.27□□□□□ -2.05
LEMD3Q9Y2U8 RNU7-85P-201ENST00000458851 63 ntBASIC2.27□□□□□ -2.05
LEMD3Q9Y2U8 MIR8074-201ENST00000615081 81 ntBASIC2.27□□□□□ -2.05
LEMD3Q9Y2U8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LEMD3Q9Y2U8 Y_RNA.226-201ENST00000364337 114 ntBASIC2.26□□□□□ -2.05
LEMD3Q9Y2U8 RNU4-52P-201ENST00000384209 138 ntBASIC2.26□□□□□ -2.05
LEMD3Q9Y2U8 MIR4448-201ENST00000584360 86 ntBASIC2.26□□□□□ -2.05
LEMD3Q9Y2U8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.26□□□□□ -2.05
LEMD3Q9Y2U8 AC084768.2-201ENST00000622736 221 ntBASIC2.26□□□□□ -2.05
LEMD3Q9Y2U8 MIR194-1-201ENST00000384892 85 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 MIR520C-201ENST00000385005 87 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 AC004965.1-201ENST00000413033 213 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 RPS29P11-201ENST00000496507 171 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 RNU7-41P-201ENST00000515917 61 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 SNORA25.15-201ENST00000516487 89 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 RNU6-250P-201ENST00000516958 103 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 AC090897.1-201ENST00000580909 226 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 AL096840.1-201ENST00000603287 93 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.25□□□□□ -2.05
LEMD3Q9Y2U8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LEMD3Q9Y2U8 RNA5SP190-201ENST00000365222 118 ntBASIC2.24□□□□□ -2.05
LEMD3Q9Y2U8 SNORD38B-201ENST00000384690 67 ntBASIC2.24□□□□□ -2.05
LEMD3Q9Y2U8 AL161935.2-201ENST00000414627 60 ntBASIC2.24□□□□□ -2.05
LEMD3Q9Y2U8 AC027119.1-201ENST00000440877 241 ntBASIC2.24□□□□□ -2.05
LEMD3Q9Y2U8 AC114801.3-201ENST00000510231 177 ntBASIC2.24□□□□□ -2.05
LEMD3Q9Y2U8 AC133485.1-201ENST00000567176 124 ntBASIC2.24□□□□□ -2.05
LEMD3Q9Y2U8 MIR4255-201ENST00000579351 72 ntBASIC2.24□□□□□ -2.05
LEMD3Q9Y2U8 MIR8066-201ENST00000617280 78 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms