Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SNORA32-201ENST00000384072 121 ntBASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 MIR517C-201ENST00000385103 95 ntBASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 MIR29C-201ENST00000385231 88 ntBASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 RNU4-83P-201ENST00000410863 133 ntBASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 BX276092.1-201ENST00000427368 251 ntBASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 AC093729.1-201ENST00000513074 128 ntBASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
NOTCH3Q9UM47 Y_RNA.448-201ENST00000384185 108 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU6-480P-201ENST00000384332 107 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 MIR181B2-201ENST00000385004 89 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1307P-201ENST00000391012 103 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU11-3P-201ENST00000391111 133 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 MIR548G-201ENST00000408442 89 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU1-98P-201ENST00000458992 160 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 SNORD4B-201ENST00000459083 72 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 SEM1P1-201ENST00000506694 209 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 AC114801.3-201ENST00000510231 177 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU6-70P-201ENST00000516438 60 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 SNORD59.2-201ENST00000516873 68 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU6-56P-201ENST00000516986 93 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 AC019176.1-201ENST00000518519 225 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 AC090897.1-201ENST00000580909 226 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNA5SP257-201ENST00000363023 116 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU6-161P-201ENST00000363051 106 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU1-42P-201ENST00000364033 160 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU6-519P-201ENST00000410590 108 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 AC125388.1-201ENST00000459631 156 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 RNU7-153P-201ENST00000516455 62 ntBASIC1.24□□□□□ -2.21
NOTCH3Q9UM47 Y_RNA.57-201ENST00000362806 113 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 Y_RNA.340-201ENST00000365330 92 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 MIR34C-201ENST00000384831 77 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 MIR526A1-201ENST00000384897 85 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 MIR591-201ENST00000385290 95 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNA5SP109-201ENST00000391010 116 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 snoU13.2-201ENST00000459201 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 SUB1P4-201ENST00000566062 339 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 MIR5094-201ENST00000578766 85 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 AC020891.4-201ENST00000605745 93 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 SNORD14A-201ENST00000606526 91 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 AL662814.1-201ENST00000617364 121 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 HSBP1P2-201ENST00000299671 229 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1244P-201ENST00000363614 108 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-950P-201ENST00000384651 107 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1067P-201ENST00000384752 107 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1237P-201ENST00000384777 107 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 MIR1236-201ENST00000408340 102 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-447P-201ENST00000410293 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1118P-201ENST00000410382 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1076P-201ENST00000410397 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-355P-201ENST00000410427 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-791P-201ENST00000410467 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-705P-201ENST00000410601 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1100P-201ENST00000410691 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-860P-201ENST00000410860 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-1217P-201ENST00000411276 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-785P-201ENST00000411324 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RPS29P1-201ENST00000465274 159 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-523P-201ENST00000516304 54 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 SNORA25.13-201ENST00000516395 103 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 MIR4764-201ENST00000580680 88 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 MIR4536-1-201ENST00000583537 88 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 U6.90-201ENST00000614007 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 AL449363.1-201ENST00000617815 186 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 U6.70-201ENST00000620287 104 ntBASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
NOTCH3Q9UM47 RNU6-987P-201ENST00000384759 104 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 MIR218-1-201ENST00000384999 110 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 STAG3L5P-204ENST00000443759 179 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 MIR4446-201ENST00000578505 67 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 MIR1297-201ENST00000637311 77 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 SNORA63.2-201ENST00000362603 126 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 RNU4-52P-201ENST00000384209 138 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 MIR520H-201ENST00000385126 88 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 HMGN2P38-201ENST00000423806 265 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 AC018868.1-201ENST00000491307 315 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 RNA5SP121-201ENST00000516537 101 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 AC133485.1-201ENST00000567176 124 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 AC008133.2-201ENST00000624540 351 ntBASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.22□□□□□ -2.21
NOTCH3Q9UM47 RNU4-32P-201ENST00000363404 141 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 RNY1P13-201ENST00000365030 105 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 MIR635-201ENST00000384830 98 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 MIR144-201ENST00000384886 86 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 HSPE1P9-201ENST00000440046 311 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 HSPE1P24-201ENST00000450782 238 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 ICE2P2-201ENST00000483823 2787 ntBASIC1.21□□□□□ -2.22
NOTCH3Q9UM47 AC026271.5-201ENST00000577873 130 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms