Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
SMARCAL1Q9NZC9 MIR19B1-201ENST00000384829 87 ntBASIC0.96□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6-1168P-201ENST00000390831 104 ntBASIC0.96□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.96□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6-994P-201ENST00000410507 111 ntBASIC0.96□□□□□ -2.26
SMARCAL1Q9NZC9 AC023934.1-201ENST00000574529 2389 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 Y_RNA.213-201ENST00000364178 111 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 Y_RNA.299-201ENST00000364973 94 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 MIR759-201ENST00000390224 91 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6-1154P-201ENST00000391001 104 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 MIR4771-2-201ENST00000577758 74 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 MIR4771-1-201ENST00000582617 74 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 SNORA4-201ENST00000584302 138 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 AL359881.1-201ENST00000602916 267 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 AC020891.4-201ENST00000605745 93 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 AC087741.2-201ENST00000619415 172 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
SMARCAL1Q9NZC9 MIR489-201ENST00000384923 84 ntBASIC0.94□□□□□ -2.26
SMARCAL1Q9NZC9 MIR548A1-201ENST00000385041 97 ntBASIC0.94□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
SMARCAL1Q9NZC9 MIR18B-201ENST00000454574 71 ntBASIC0.94□□□□□ -2.26
SMARCAL1Q9NZC9 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
SMARCAL1Q9NZC9 SNORD67.1-201ENST00000516618 108 ntBASIC0.94□□□□□ -2.26
SMARCAL1Q9NZC9 MIR3163-201ENST00000581592 73 ntBASIC0.94□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6-369P-201ENST00000362515 102 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 SNORD114-22-201ENST00000365423 72 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6-949P-201ENST00000384040 107 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6-616P-201ENST00000384353 107 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 U8.15-201ENST00000390947 134 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 RPS26P5-201ENST00000418544 335 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 RPL39P25-201ENST00000449384 154 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6-313P-201ENST00000516317 112 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6-479P-201ENST00000516348 105 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 Y_RNA.773-201ENST00000607168 90 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 AC105081.1-201ENST00000617727 106 ntBASIC0.93□□□□□ -2.26
SMARCAL1Q9NZC9 Y_RNA.353-201ENST00000365440 108 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 MT-TF-201ENST00000387314 71 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 SNORD89-201ENST00000390981 114 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 SNORD77B-201ENST00000391112 67 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 SNORD93-201ENST00000408813 74 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 RNU2-51P-201ENST00000410708 197 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 Y_RNA.649-201ENST00000459077 103 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 RNU7-185P-201ENST00000459215 60 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 RNU7-137P-201ENST00000516788 62 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 U6.95-201ENST00000636931 70 ntBASIC0.92□□□□□ -2.26
SMARCAL1Q9NZC9 RNA5SP205-201ENST00000364653 136 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 Y_RNA.563-201ENST00000384707 108 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 MIR548D2-201ENST00000384955 97 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 MIR100-201ENST00000385259 80 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 MIR548A3-201ENST00000385297 97 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 AC096949.1-201ENST00000412047 152 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 MTND5P34-201ENST00000568888 325 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 MIR4676-201ENST00000583078 72 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 MIR1255B1-201ENST00000636325 63 ntBASIC0.91□□□□□ -2.26
SMARCAL1Q9NZC9 MIR1-1-201ENST00000362147 71 ntBASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 MIR200A-201ENST00000384875 90 ntBASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 MIR1257-201ENST00000408490 117 ntBASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 AC067940.1-201ENST00000458411 300 ntBASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 AL670379.3-201ENST00000605040 251 ntBASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SMARCAL1Q9NZC9 RNY4P6-201ENST00000363667 96 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 Y_RNA.466-201ENST00000384294 113 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 MIR206-201ENST00000384872 86 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-1307P-201ENST00000391012 103 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 MIR1827-201ENST00000408549 66 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-977P-201ENST00000516411 103 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 AC007012.1-201ENST00000567192 175 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 RMST_2.1-201ENST00000617263 136 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 AL035470.1-201ENST00000622571 220 ntBASIC0.89□□□□□ -2.27
SMARCAL1Q9NZC9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 SNORD115-19-201ENST00000363098 82 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-403P-201ENST00000363163 104 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 SNORD115-18-201ENST00000363293 82 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 SNORD114-10-201ENST00000363409 72 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 SNORD115-17-201ENST00000364612 82 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 Y_RNA.362-201ENST00000365518 110 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 Y_RNA.549-201ENST00000384657 102 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6-1321P-201ENST00000390905 107 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 MIR4491-201ENST00000581087 68 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 MIR4804-201ENST00000581683 73 ntBASIC0.88□□□□□ -2.27
SMARCAL1Q9NZC9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 MIR520F-201ENST00000384824 87 ntBASIC0.87□□□□□ -2.27
SMARCAL1Q9NZC9 MIR125B2-201ENST00000385128 89 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms