Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.55□□□□□ -2
CUEDC1Q9NWM3 RNA5SP68-201ENST00000363885 119 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 Y_RNA.283-201ENST00000364798 112 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 Y_RNA.491-201ENST00000384417 107 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 RNU6-800P-201ENST00000384473 103 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 MIR144-201ENST00000384886 86 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 RNU6-360P-201ENST00000390944 104 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 RNU6-243P-201ENST00000391140 107 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 HMGN2P19-201ENST00000425149 265 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 AC015818.7-201ENST00000428754 109 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 RNA5SP233-201ENST00000459153 113 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 RNU6-75P-201ENST00000515944 104 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 RNU6-322P-201ENST00000516010 103 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 AL627230.6-201ENST00000611129 280 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 MIR6817-201ENST00000615588 66 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 U6.109-201ENST00000636749 87 ntBASIC2.55□□□□□ -2
CUEDC1Q9NWM3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CUEDC1Q9NWM3 Y_RNA.119-201ENST00000363301 96 ntBASIC2.54□□□□□ -2
CUEDC1Q9NWM3 SNORA67.4-201ENST00000384688 142 ntBASIC2.54□□□□□ -2
CUEDC1Q9NWM3 MIR563-201ENST00000385080 79 ntBASIC2.54□□□□□ -2
CUEDC1Q9NWM3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
CUEDC1Q9NWM3 RNU6-482P-201ENST00000391068 107 ntBASIC2.54□□□□□ -2
CUEDC1Q9NWM3 RNU6-466P-201ENST00000391224 103 ntBASIC2.54□□□□□ -2
CUEDC1Q9NWM3 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
CUEDC1Q9NWM3 AL096861.1-201ENST00000610899 123 ntBASIC2.54□□□□□ -2
CUEDC1Q9NWM3 U6.111-201ENST00000636093 83 ntBASIC2.54□□□□□ -2
CUEDC1Q9NWM3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
CUEDC1Q9NWM3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CUEDC1Q9NWM3 RNA5SP48-201ENST00000363969 126 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 RNU6-132P-201ENST00000383863 107 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 RNU6-471P-201ENST00000383944 106 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 MIR653-201ENST00000385279 96 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 SNORD30.1-201ENST00000391309 70 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 Y_RNA.596-201ENST00000410462 109 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 BX276092.1-201ENST00000427368 251 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 YWHAEP2-201ENST00000580066 112 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 YWHAEP3-201ENST00000582767 121 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 SNORA4-201ENST00000584302 138 ntBASIC2.53□□□□□ -2
CUEDC1Q9NWM3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CUEDC1Q9NWM3 RNU6-540P-201ENST00000384622 101 ntBASIC2.52□□□□□ -2.01
CUEDC1Q9NWM3 AC244023.1-201ENST00000426884 112 ntBASIC2.52□□□□□ -2.01
CUEDC1Q9NWM3 AC009474.2-201ENST00000451383 136 ntBASIC2.52□□□□□ -2.01
CUEDC1Q9NWM3 AC242498.1-201ENST00000604134 111 ntBASIC2.52□□□□□ -2.01
CUEDC1Q9NWM3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CUEDC1Q9NWM3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.52□□□□□ -2.01
CUEDC1Q9NWM3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CUEDC1Q9NWM3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CUEDC1Q9NWM3 MIR588-201ENST00000384900 83 ntBASIC2.51□□□□□ -2.01
CUEDC1Q9NWM3 MIR676-201ENST00000390702 67 ntBASIC2.51□□□□□ -2.01
CUEDC1Q9NWM3 RNU7-41P-201ENST00000515917 61 ntBASIC2.51□□□□□ -2.01
CUEDC1Q9NWM3 MIR516A2-201ENST00000384888 90 ntBASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 MIR516A1-201ENST00000385033 90 ntBASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 SNORA3.2-201ENST00000408221 125 ntBASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 AL356379.1-201ENST00000414105 126 ntBASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 AC245517.4-201ENST00000448601 281 ntBASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
CUEDC1Q9NWM3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 Y_RNA.12-201ENST00000362393 112 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 MIR518E-201ENST00000385252 88 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 RNA5SP425-201ENST00000410336 112 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 RPL23AP42-201ENST00000471152 471 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 AC108210.2-201ENST00000503681 201 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 RNA5SP148-201ENST00000516527 94 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 SNORA44.1-201ENST00000517031 108 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 AC015712.3-201ENST00000559380 164 ntBASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CUEDC1Q9NWM3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
CUEDC1Q9NWM3 RNU6-1241P-201ENST00000384536 107 ntBASIC2.48□□□□□ -2.01
CUEDC1Q9NWM3 RNU6-987P-201ENST00000384759 104 ntBASIC2.48□□□□□ -2.01
CUEDC1Q9NWM3 MIR154-201ENST00000385243 84 ntBASIC2.48□□□□□ -2.01
CUEDC1Q9NWM3 PRELID3BP2-201ENST00000605362 201 ntBASIC2.48□□□□□ -2.01
CUEDC1Q9NWM3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CUEDC1Q9NWM3 Y_RNA.36-201ENST00000362602 112 ntBASIC2.47□□□□□ -2.01
CUEDC1Q9NWM3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CUEDC1Q9NWM3 RNU6-663P-201ENST00000391105 106 ntBASIC2.47□□□□□ -2.01
CUEDC1Q9NWM3 MIR942-201ENST00000401111 86 ntBASIC2.47□□□□□ -2.01
CUEDC1Q9NWM3 RNA5SP445-201ENST00000515889 115 ntBASIC2.47□□□□□ -2.01
CUEDC1Q9NWM3 MIR4264-201ENST00000583520 66 ntBASIC2.47□□□□□ -2.01
CUEDC1Q9NWM3 MIR664A-201ENST00000626086 82 ntBASIC2.47□□□□□ -2.01
CUEDC1Q9NWM3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CUEDC1Q9NWM3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
CUEDC1Q9NWM3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.01
CUEDC1Q9NWM3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 MIR6073-201ENST00000352083 89 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 MIR30D-201ENST00000362283 70 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 RNU6-396P-201ENST00000365369 105 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 AL603825.1-201ENST00000438481 80 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 AC093423.1-201ENST00000440817 142 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms