Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC006386.2-201ENST00000624491 75 ntBASIC2.54□□□□□ -2
USB1Q9BQ65 AC012005.1-201ENST00000624575 75 ntBASIC2.54□□□□□ -2
USB1Q9BQ65 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USB1Q9BQ65 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USB1Q9BQ65 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
USB1Q9BQ65 MIR103A2-201ENST00000362154 78 ntBASIC2.53□□□□□ -2
USB1Q9BQ65 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
USB1Q9BQ65 U8.13-201ENST00000390842 128 ntBASIC2.53□□□□□ -2
USB1Q9BQ65 RNA5SP95-201ENST00000410319 137 ntBASIC2.53□□□□□ -2
USB1Q9BQ65 Y_RNA.596-201ENST00000410462 109 ntBASIC2.53□□□□□ -2
USB1Q9BQ65 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
USB1Q9BQ65 RNU7-195P-201ENST00000458793 62 ntBASIC2.53□□□□□ -2
USB1Q9BQ65 AC055731.1-201ENST00000474387 401 ntBASIC2.53□□□□□ -2
USB1Q9BQ65 TRAJ51-201ENST00000504127 63 ntBASIC2.53□□□□□ -2
USB1Q9BQ65 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
USB1Q9BQ65 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
USB1Q9BQ65 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
USB1Q9BQ65 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
USB1Q9BQ65 RNU6-654P-201ENST00000364373 107 ntBASIC2.52□□□□□ -2.01
USB1Q9BQ65 Y_RNA.536-201ENST00000384621 113 ntBASIC2.52□□□□□ -2.01
USB1Q9BQ65 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
USB1Q9BQ65 AC087499.2-201ENST00000432861 149 ntBASIC2.52□□□□□ -2.01
USB1Q9BQ65 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
USB1Q9BQ65 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USB1Q9BQ65 AL596028.1-201ENST00000326971 197 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 MIR26A1-201ENST00000362205 77 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 RNA5SP264-201ENST00000363115 107 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 SNORA5B-201ENST00000363786 132 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 RNU6-580P-201ENST00000365159 107 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 Y_RNA.510-201ENST00000384511 114 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 RPS29P6-201ENST00000438196 145 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 snoU13.17-201ENST00000458802 104 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 SNORA77B-201ENST00000578179 125 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 MIR548H5-201ENST00000580314 60 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 AC013244.2-201ENST00000603396 103 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 RNU7-10P-201ENST00000607194 63 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
USB1Q9BQ65 RNU6-1051P-201ENST00000365471 102 ntBASIC2.5□□□□□ -2.01
USB1Q9BQ65 SNORD30.1-201ENST00000391309 70 ntBASIC2.5□□□□□ -2.01
USB1Q9BQ65 MIR1265-201ENST00000408444 86 ntBASIC2.5□□□□□ -2.01
USB1Q9BQ65 MIR4513-201ENST00000581077 86 ntBASIC2.5□□□□□ -2.01
USB1Q9BQ65 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USB1Q9BQ65 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USB1Q9BQ65 Y_RNA.239-201ENST00000364444 113 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 SNORA8.1-201ENST00000384250 140 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 MIR512-1-201ENST00000384913 84 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 RNU2-59P-201ENST00000410482 191 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 RNA5SP184-201ENST00000411071 108 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.49□□□□□ -2.01
USB1Q9BQ65 SNORA31.11-201ENST00000516528 139 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 SNRPGP19-201ENST00000603826 189 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 TRDV1-202ENST00000621643 102 ntBASIC2.49□□□□□ -2.01
USB1Q9BQ65 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USB1Q9BQ65 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
USB1Q9BQ65 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
USB1Q9BQ65 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
USB1Q9BQ65 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USB1Q9BQ65 RNU6-1241P-201ENST00000384536 107 ntBASIC2.48□□□□□ -2.01
USB1Q9BQ65 RNU6-540P-201ENST00000384622 101 ntBASIC2.48□□□□□ -2.01
USB1Q9BQ65 MIR154-201ENST00000385243 84 ntBASIC2.48□□□□□ -2.01
USB1Q9BQ65 MIR519A1-201ENST00000385257 85 ntBASIC2.48□□□□□ -2.01
USB1Q9BQ65 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
USB1Q9BQ65 Y_RNA.809-201ENST00000516058 95 ntBASIC2.48□□□□□ -2.01
USB1Q9BQ65 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.48□□□□□ -2.01
USB1Q9BQ65 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
USB1Q9BQ65 Y_RNA.42-201ENST00000362660 108 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 Y_RNA.207-201ENST00000364142 106 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 RNY4P3-201ENST00000365254 95 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 Y_RNA.386-201ENST00000383913 105 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 SNORD23.1-201ENST00000408212 104 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 RNA5SP21-201ENST00000410917 96 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 AL606490.4-201ENST00000423117 127 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 RPS27P16-201ENST00000425758 201 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 MIR3162-201ENST00000581818 82 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 AC245884.12-201ENST00000615364 59 ntBASIC2.47□□□□□ -2.01
USB1Q9BQ65 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.01
USB1Q9BQ65 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USB1Q9BQ65 Y_RNA.36-201ENST00000362602 112 ntBASIC2.46□□□□□ -2.02
USB1Q9BQ65 RNU6-1260P-201ENST00000362944 107 ntBASIC2.46□□□□□ -2.02
USB1Q9BQ65 Y_RNA.500-201ENST00000384466 111 ntBASIC2.46□□□□□ -2.02
USB1Q9BQ65 RNU7-185P-201ENST00000459215 60 ntBASIC2.46□□□□□ -2.02
USB1Q9BQ65 RNA5SP356-201ENST00000515972 94 ntBASIC2.46□□□□□ -2.02
USB1Q9BQ65 MIR3605-201ENST00000583214 100 ntBASIC2.46□□□□□ -2.02
USB1Q9BQ65 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.46□□□□□ -2.02
USB1Q9BQ65 AC023934.1-201ENST00000574529 2389 ntBASIC2.46□□□□□ -2.02
USB1Q9BQ65 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USB1Q9BQ65 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.45□□□□□ -2.02
USB1Q9BQ65 Y_RNA.56-201ENST00000362798 112 ntBASIC2.45□□□□□ -2.02
USB1Q9BQ65 Y_RNA.371-201ENST00000365591 113 ntBASIC2.45□□□□□ -2.02
USB1Q9BQ65 DEFA7P-201ENST00000382676 285 ntBASIC2.45□□□□□ -2.02
USB1Q9BQ65 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USB1Q9BQ65 AC092628.1-201ENST00000436250 252 ntBASIC2.45□□□□□ -2.02
USB1Q9BQ65 MIR8074-201ENST00000615081 81 ntBASIC2.45□□□□□ -2.02
USB1Q9BQ65 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USB1Q9BQ65 ZNF658B-202ENST00000615961 3375 ntBASIC2.44□□□□□ -2.02
USB1Q9BQ65 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
USB1Q9BQ65 RNU6-664P-201ENST00000362381 107 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 242.1 ms