Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 RNA5SP144-201ENST00000410846 116 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 RNU7-113P-201ENST00000459273 62 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.3□□□□□ -2.46
CCDC43Q96MW1 RNY1P6-201ENST00000384193 109 ntBASIC-0.31□□□□□ -2.46
CCDC43Q96MW1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.31□□□□□ -2.46
CCDC43Q96MW1 SNORA70.25-201ENST00000612741 95 ntBASIC-0.31□□□□□ -2.46
CCDC43Q96MW1 RNU6-161P-201ENST00000363051 106 ntBASIC-0.32□□□□□ -2.46
CCDC43Q96MW1 MIR501-201ENST00000390204 84 ntBASIC-0.32□□□□□ -2.46
CCDC43Q96MW1 MTND4LP11-201ENST00000422184 280 ntBASIC-0.32□□□□□ -2.46
CCDC43Q96MW1 RNA5SP33-201ENST00000516687 98 ntBASIC-0.32□□□□□ -2.46
CCDC43Q96MW1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.32□□□□□ -2.46
CCDC43Q96MW1 AC138749.4-201ENST00000563970 127 ntBASIC-0.32□□□□□ -2.46
CCDC43Q96MW1 MIR4643-201ENST00000577473 78 ntBASIC-0.32□□□□□ -2.46
CCDC43Q96MW1 AC006504.6-201ENST00000590142 199 ntBASIC-0.32□□□□□ -2.46
CCDC43Q96MW1 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 RNA5SP98-201ENST00000363158 137 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 SNORA33.2-201ENST00000365413 134 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 RNU6-578P-201ENST00000390980 103 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 AL022718.1-201ENST00000412004 84 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 AC244505.6-201ENST00000452829 130 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 RNY3P16-201ENST00000516338 101 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 MIR1295B-201ENST00000636144 60 ntBASIC-0.33□□□□□ -2.46
CCDC43Q96MW1 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.34□□□□□ -2.46
CCDC43Q96MW1 RNU6-269P-201ENST00000391077 97 ntBASIC-0.34□□□□□ -2.46
CCDC43Q96MW1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.34□□□□□ -2.46
CCDC43Q96MW1 RNU7-161P-201ENST00000517289 62 ntBASIC-0.34□□□□□ -2.46
CCDC43Q96MW1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.34□□□□□ -2.46
CCDC43Q96MW1 RNU6-639P-201ENST00000384074 107 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 MT-TW-201ENST00000387382 68 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 RNU7-104P-201ENST00000459398 79 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 SNORD67.1-201ENST00000516618 108 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 MIR4645-201ENST00000583158 77 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 AL356055.1-201ENST00000602528 446 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 AC105081.1-201ENST00000617727 106 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 AL162376.1-201ENST00000624117 175 ntBASIC-0.35□□□□□ -2.47
CCDC43Q96MW1 SNORD115-2-201ENST00000362842 82 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 SNORD115-20-201ENST00000365099 82 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 MIR1302-6-201ENST00000408466 90 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 RNA5SP163-201ENST00000410304 99 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 RNU7-165P-201ENST00000458864 60 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 AC104692.1-201ENST00000472406 90 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 AL117351.2-201ENST00000513571 157 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 RNU7-137P-201ENST00000516788 62 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 MIR5706-201ENST00000579841 80 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 AC011921.3-201ENST00000605540 361 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.36□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 RNU6-238P-201ENST00000363313 106 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 RNU6-635P-201ENST00000516651 102 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 AL359881.1-201ENST00000602916 267 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 AL360085.1-201ENST00000604713 532 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 RNU2-4P-201ENST00000606190 192 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 U6.104-201ENST00000637979 90 ntBASIC-0.37□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 SNORA25.7-201ENST00000364375 127 ntBASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 RNY1P2-201ENST00000364820 117 ntBASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 MIR5589-201ENST00000579442 60 ntBASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 MIR548AD-201ENST00000584780 82 ntBASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 MIR8062-201ENST00000621515 85 ntBASIC-0.38□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.39□□□□□ -2.47
CCDC43Q96MW1 RNU6-643P-201ENST00000384018 107 ntBASIC-0.39□□□□□ -2.47
CCDC43Q96MW1 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.39□□□□□ -2.47
CCDC43Q96MW1 MIR1912-201ENST00000410389 80 ntBASIC-0.39□□□□□ -2.47
CCDC43Q96MW1 MIR548H5-201ENST00000580314 60 ntBASIC-0.39□□□□□ -2.47
CCDC43Q96MW1 MIR548AE2-201ENST00000583456 67 ntBASIC-0.39□□□□□ -2.47
CCDC43Q96MW1 MIR3925-201ENST00000584674 77 ntBASIC-0.39□□□□□ -2.47
CCDC43Q96MW1 U7.6-201ENST00000610841 64 ntBASIC-0.39□□□□□ -2.47
CCDC43Q96MW1 RNU6-493P-201ENST00000391321 108 ntBASIC-0.4□□□□□ -2.47
CCDC43Q96MW1 MTATP8P1-201ENST00000467115 207 ntBASIC-0.4□□□□□ -2.47
CCDC43Q96MW1 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.4□□□□□ -2.47
CCDC43Q96MW1 AC098479.1-201ENST00000609225 154 ntBASIC-0.4□□□□□ -2.47
CCDC43Q96MW1 SNORD114-10-201ENST00000363409 72 ntBASIC-0.41□□□□□ -2.48
CCDC43Q96MW1 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.41□□□□□ -2.48
CCDC43Q96MW1 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.41□□□□□ -2.48
CCDC43Q96MW1 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.41□□□□□ -2.48
CCDC43Q96MW1 RNA5SP395-201ENST00000516567 118 ntBASIC-0.41□□□□□ -2.48
CCDC43Q96MW1 RNA5SP403-201ENST00000363598 108 ntBASIC-0.42□□□□□ -2.48
CCDC43Q96MW1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
CCDC43Q96MW1 RNU6-867P-201ENST00000364956 107 ntBASIC-0.42□□□□□ -2.48
CCDC43Q96MW1 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.42□□□□□ -2.48
CCDC43Q96MW1 MTCYBP6-201ENST00000441810 138 ntBASIC-0.42□□□□□ -2.48
CCDC43Q96MW1 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.42□□□□□ -2.48
CCDC43Q96MW1 MIR4677-201ENST00000584153 80 ntBASIC-0.42□□□□□ -2.48
CCDC43Q96MW1 RNU6-429P-201ENST00000384582 108 ntBASIC-0.43□□□□□ -2.48
CCDC43Q96MW1 Z95118.1-201ENST00000421372 247 ntBASIC-0.43□□□□□ -2.48
CCDC43Q96MW1 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.43□□□□□ -2.48
CCDC43Q96MW1 MIR8064-201ENST00000612863 90 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms