Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SNORD90-201ENST00000391145 111 ntBASIC2.75□□□□□ -1.97
SCUBE3Q8IX30 snoU13.17-201ENST00000458802 104 ntBASIC2.75□□□□□ -1.97
SCUBE3Q8IX30 Y_RNA.676-201ENST00000516393 96 ntBASIC2.75□□□□□ -1.97
SCUBE3Q8IX30 MIR3192-201ENST00000584920 77 ntBASIC2.75□□□□□ -1.97
SCUBE3Q8IX30 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.75□□□□□ -1.97
SCUBE3Q8IX30 AC131280.1-202ENST00000624067 4211 ntBASIC2.75□□□□□ -1.97
SCUBE3Q8IX30 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCUBE3Q8IX30 RNU6-471P-201ENST00000383944 106 ntBASIC2.74□□□□□ -1.97
SCUBE3Q8IX30 SNORA8.1-201ENST00000384250 140 ntBASIC2.74□□□□□ -1.97
SCUBE3Q8IX30 MT-TF-201ENST00000387314 71 ntBASIC2.74□□□□□ -1.97
SCUBE3Q8IX30 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
SCUBE3Q8IX30 SNORD63B-201ENST00000411005 70 ntBASIC2.74□□□□□ -1.97
SCUBE3Q8IX30 RNU6-531P-201ENST00000516694 104 ntBASIC2.74□□□□□ -1.97
SCUBE3Q8IX30 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 Y_RNA.36-201ENST00000362602 112 ntBASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 RNU4-58P-201ENST00000363192 141 ntBASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 RNA5SP259-201ENST00000365541 109 ntBASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 SNORA67.4-201ENST00000384688 142 ntBASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 RNA5SP270-201ENST00000411361 118 ntBASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 RNU6-1194P-201ENST00000516208 104 ntBASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 MIR4491-201ENST00000581087 68 ntBASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SCUBE3Q8IX30 RNA5SP68-201ENST00000363885 119 ntBASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 RNU6-53P-201ENST00000365367 106 ntBASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 RNU6-663P-201ENST00000391105 106 ntBASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 RNU7-62P-201ENST00000458856 62 ntBASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 MIR4658-201ENST00000584344 65 ntBASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 ZNF658B-202ENST00000615961 3375 ntBASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SCUBE3Q8IX30 SNORD41-201ENST00000386967 70 ntBASIC2.71□□□□□ -1.98
SCUBE3Q8IX30 MT-TN-201ENST00000387400 73 ntBASIC2.71□□□□□ -1.98
SCUBE3Q8IX30 RNU6-205P-201ENST00000390858 107 ntBASIC2.71□□□□□ -1.98
SCUBE3Q8IX30 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
SCUBE3Q8IX30 MIR6817-201ENST00000615588 66 ntBASIC2.71□□□□□ -1.98
SCUBE3Q8IX30 U4.3-201ENST00000621047 82 ntBASIC2.71□□□□□ -1.98
SCUBE3Q8IX30 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.71□□□□□ -1.98
SCUBE3Q8IX30 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 Y_RNA.42-201ENST00000362660 108 ntBASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 SNORA25.3-201ENST00000363205 127 ntBASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 SNORD115-31-201ENST00000365318 82 ntBASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 MIR513A1-201ENST00000385138 129 ntBASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 RNU6-482P-201ENST00000391068 107 ntBASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 MIR942-201ENST00000401111 86 ntBASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 RPL30P7-201ENST00000479312 323 ntBASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 MIR2115-201ENST00000516657 100 ntBASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCUBE3Q8IX30 RNU6-1051P-201ENST00000365471 102 ntBASIC2.69□□□□□ -1.98
SCUBE3Q8IX30 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.69□□□□□ -1.98
SCUBE3Q8IX30 RNA5SP450-201ENST00000411206 102 ntBASIC2.69□□□□□ -1.98
SCUBE3Q8IX30 SNORA25.16-201ENST00000516741 121 ntBASIC2.69□□□□□ -1.98
SCUBE3Q8IX30 RNU7-156P-201ENST00000517214 74 ntBASIC2.69□□□□□ -1.98
SCUBE3Q8IX30 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCUBE3Q8IX30 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SCUBE3Q8IX30 RNY4P3-201ENST00000365254 95 ntBASIC2.68□□□□□ -1.98
SCUBE3Q8IX30 SNORA3.2-201ENST00000408221 125 ntBASIC2.68□□□□□ -1.98
SCUBE3Q8IX30 RN7SL274P-201ENST00000492268 272 ntBASIC2.68□□□□□ -1.98
SCUBE3Q8IX30 RNU6-922P-201ENST00000516753 99 ntBASIC2.68□□□□□ -1.98
SCUBE3Q8IX30 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCUBE3Q8IX30 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCUBE3Q8IX30 RNU6-330P-201ENST00000363015 107 ntBASIC2.67□□□□□ -1.98
SCUBE3Q8IX30 RNU6-340P-201ENST00000364005 107 ntBASIC2.67□□□□□ -1.98
SCUBE3Q8IX30 Y_RNA.207-201ENST00000364142 106 ntBASIC2.67□□□□□ -1.98
SCUBE3Q8IX30 Y_RNA.371-201ENST00000365591 113 ntBASIC2.67□□□□□ -1.98
SCUBE3Q8IX30 AL161935.2-201ENST00000414627 60 ntBASIC2.67□□□□□ -1.98
SCUBE3Q8IX30 AL603825.1-201ENST00000438481 80 ntBASIC2.67□□□□□ -1.98
SCUBE3Q8IX30 AC093423.1-201ENST00000440817 142 ntBASIC2.67□□□□□ -1.98
SCUBE3Q8IX30 AC015712.3-201ENST00000559380 164 ntBASIC2.67□□□□□ -1.98
SCUBE3Q8IX30 Y_RNA.239-201ENST00000364444 113 ntBASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 RNU6-154P-201ENST00000384306 106 ntBASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 RNU6-291P-201ENST00000384720 107 ntBASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 MIR27B-201ENST00000385129 97 ntBASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 Y_RNA.588-201ENST00000391254 102 ntBASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 SNORD93-201ENST00000408813 74 ntBASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 AC108210.2-201ENST00000503681 201 ntBASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 RNA5SP148-201ENST00000516527 94 ntBASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.66□□□□□ -1.98
SCUBE3Q8IX30 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
SCUBE3Q8IX30 RNU6-681P-201ENST00000364012 104 ntBASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 RPS27P16-201ENST00000425758 201 ntBASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 RNA5SP320-201ENST00000516263 124 ntBASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 RNU7-10P-201ENST00000607194 63 ntBASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 uc_338.6-201ENST00000613544 171 ntBASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 FO624990.1-201ENST00000636373 85 ntBASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SCUBE3Q8IX30 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 Y_RNA.536-201ENST00000384621 113 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 SNORD100-201ENST00000408573 76 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 MIR18B-201ENST00000454574 71 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 RNU7-195P-201ENST00000458793 62 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 TRAJ51-201ENST00000504127 63 ntBASIC2.64□□□□□ -1.99
SCUBE3Q8IX30 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 314 ms