Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNA5SP144-201ENST00000410846 116 ntBASIC0.19□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.668-201ENST00000516233 93 ntBASIC0.19□□□□□ -2.38
PRPF39Q86UA1 RNU6-1258P-201ENST00000516911 111 ntBASIC0.19□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.18□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.133-201ENST00000363428 110 ntBASIC0.18□□□□□ -2.38
PRPF39Q86UA1 RNU6-690P-201ENST00000365242 106 ntBASIC0.18□□□□□ -2.38
PRPF39Q86UA1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
PRPF39Q86UA1 AC096949.1-201ENST00000412047 152 ntBASIC0.18□□□□□ -2.38
PRPF39Q86UA1 AC112693.2-201ENST00000556538 232 ntBASIC0.18□□□□□ -2.38
PRPF39Q86UA1 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.30-201ENST00000362572 97 ntBASIC0.17□□□□□ -2.38
PRPF39Q86UA1 RNU4-58P-201ENST00000363192 141 ntBASIC0.17□□□□□ -2.38
PRPF39Q86UA1 SNORA32-201ENST00000384072 121 ntBASIC0.17□□□□□ -2.38
PRPF39Q86UA1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.17□□□□□ -2.38
PRPF39Q86UA1 MIR101-2-201ENST00000362195 79 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.60-201ENST00000362831 98 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.162-201ENST00000363683 102 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.470-201ENST00000384307 117 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 MIR568-201ENST00000385036 95 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 SNORD58.1-201ENST00000391313 66 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 RNU6-1045P-201ENST00000516321 107 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 RNU6-531P-201ENST00000516694 104 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 AC069113.3-201ENST00000521019 150 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 U4.1-201ENST00000620349 87 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 AC078938.1-201ENST00000620993 318 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 AC091304.10-201ENST00000641554 121 ntBASIC0.16□□□□□ -2.38
PRPF39Q86UA1 RNA5SP133-201ENST00000363368 119 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 RNU6-818P-201ENST00000364837 108 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 AC107027.2-201ENST00000512197 115 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 RNU6-1023P-201ENST00000516137 106 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 RNU7-35P-201ENST00000517174 62 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 MIR4639-201ENST00000584938 69 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 MIR7107-201ENST00000611489 80 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 U6.109-201ENST00000636749 87 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
PRPF39Q86UA1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.14□□□□□ -2.39
PRPF39Q86UA1 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
PRPF39Q86UA1 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
PRPF39Q86UA1 MTATP6P21-201ENST00000440681 189 ntBASIC0.14□□□□□ -2.39
PRPF39Q86UA1 AC069271.1-201ENST00000445577 156 ntBASIC0.14□□□□□ -2.39
PRPF39Q86UA1 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.83-201ENST00000363005 113 ntBASIC0.13□□□□□ -2.39
PRPF39Q86UA1 RNA5SP257-201ENST00000363023 116 ntBASIC0.13□□□□□ -2.39
PRPF39Q86UA1 RNU6-1020P-201ENST00000363684 107 ntBASIC0.13□□□□□ -2.39
PRPF39Q86UA1 RNU6-768P-201ENST00000384683 107 ntBASIC0.13□□□□□ -2.39
PRPF39Q86UA1 SNORD28-201ENST00000384706 75 ntBASIC0.13□□□□□ -2.39
PRPF39Q86UA1 RNU6-111P-201ENST00000517179 105 ntBASIC0.13□□□□□ -2.39
PRPF39Q86UA1 RNA5SP47-201ENST00000517230 109 ntBASIC0.13□□□□□ -2.39
PRPF39Q86UA1 MIR2909-201ENST00000617113 69 ntBASIC0.13□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.200-201ENST00000364018 102 ntBASIC0.12□□□□□ -2.39
PRPF39Q86UA1 RNU6-702P-201ENST00000364982 107 ntBASIC0.12□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.12□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.12□□□□□ -2.39
PRPF39Q86UA1 AC244669.1-204ENST00000621564 178 ntBASIC0.12□□□□□ -2.39
PRPF39Q86UA1 MIR411-201ENST00000362239 96 ntBASIC0.11□□□□□ -2.39
PRPF39Q86UA1 SNORA9.1-201ENST00000362412 131 ntBASIC0.11□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.120-201ENST00000363304 110 ntBASIC0.11□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.374-201ENST00000365606 101 ntBASIC0.11□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.447-201ENST00000384184 113 ntBASIC0.11□□□□□ -2.39
PRPF39Q86UA1 RNU6-918P-201ENST00000391219 106 ntBASIC0.11□□□□□ -2.39
PRPF39Q86UA1 RNU7-129P-201ENST00000516128 62 ntBASIC0.11□□□□□ -2.39
PRPF39Q86UA1 MIR4305-201ENST00000583252 102 ntBASIC0.11□□□□□ -2.39
PRPF39Q86UA1 SNORD115-2-201ENST00000362842 82 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 RNU6-1082P-201ENST00000364574 107 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 SNORD115-20-201ENST00000365099 82 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 RNU6-196P-201ENST00000384315 107 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 SNORA75.5-201ENST00000391291 81 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.680-201ENST00000516441 93 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 MIR548AE2-201ENST00000583456 67 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 AC011603.4-201ENST00000611325 277 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 MIR6755-201ENST00000619993 66 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 MIR6828-201ENST00000636181 60 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 MIR6844-201ENST00000637122 62 ntBASIC0.1□□□□□ -2.39
PRPF39Q86UA1 Y_RNA.251-201ENST00000364551 99 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 RNU6-312P-201ENST00000364629 107 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.435-201ENST00000384095 112 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 RNU6-187P-201ENST00000384139 106 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.531-201ENST00000384589 121 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 RNA5SP236-201ENST00000516169 116 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 SCARNA15.1-201ENST00000516384 125 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 SNORD67.1-201ENST00000516618 108 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 AC138907.4-201ENST00000570107 226 ntBASIC0.09□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.307-201ENST00000365022 117 ntBASIC0.08□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.357-201ENST00000365487 109 ntBASIC0.08□□□□□ -2.4
PRPF39Q86UA1 SNORD18B-201ENST00000365659 72 ntBASIC0.08□□□□□ -2.4
PRPF39Q86UA1 RNU6-240P-201ENST00000516098 97 ntBASIC0.08□□□□□ -2.4
PRPF39Q86UA1 AC021443.1-201ENST00000604478 211 ntBASIC0.08□□□□□ -2.4
PRPF39Q86UA1 AC098479.1-201ENST00000609225 154 ntBASIC0.08□□□□□ -2.4
PRPF39Q86UA1 TUG1_4.1-201ENST00000619464 181 ntBASIC0.08□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.49-201ENST00000362714 112 ntBASIC0.07□□□□□ -2.4
PRPF39Q86UA1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.07□□□□□ -2.4
PRPF39Q86UA1 SNORA63.5-201ENST00000363548 123 ntBASIC0.07□□□□□ -2.4
PRPF39Q86UA1 RNU6-47P-201ENST00000383866 107 ntBASIC0.07□□□□□ -2.4
PRPF39Q86UA1 MIR548L-201ENST00000408303 86 ntBASIC0.07□□□□□ -2.4
PRPF39Q86UA1 MTND3P2-201ENST00000438452 342 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms