Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 RNU6-675P-201ENST00000384236 104 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 MIR17-201ENST00000385012 84 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 AL356379.1-201ENST00000414105 126 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 HMGN2P23-201ENST00000456759 269 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 snoU13.9-201ENST00000458927 103 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 MIR2115-201ENST00000516657 100 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 MIR4264-201ENST00000583520 66 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 AP000753.3-201ENST00000604083 169 ntBASIC1.86□□□□□ -2.11
RNF111Q6ZNA4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.85□□□□□ -2.11
RNF111Q6ZNA4 Y_RNA.219-201ENST00000364232 113 ntBASIC1.85□□□□□ -2.11
RNF111Q6ZNA4 RNU6-219P-201ENST00000364728 107 ntBASIC1.85□□□□□ -2.11
RNF111Q6ZNA4 RNU7-62P-201ENST00000458856 62 ntBASIC1.85□□□□□ -2.11
RNF111Q6ZNA4 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
RNF111Q6ZNA4 SNORA4-201ENST00000584302 138 ntBASIC1.85□□□□□ -2.11
RNF111Q6ZNA4 MIR6516-201ENST00000630554 81 ntBASIC1.85□□□□□ -2.11
RNF111Q6ZNA4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 MIR103A2-201ENST00000362154 78 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 SNORD1A-201ENST00000364968 72 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 MIR563-201ENST00000385080 79 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 RNA5SP95-201ENST00000410319 137 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 AL133373.1-201ENST00000497098 94 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 AC090897.1-201ENST00000580909 226 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 AC020891.4-201ENST00000605745 93 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 uc_338.6-201ENST00000613544 171 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 U6.109-201ENST00000636749 87 ntBASIC1.84□□□□□ -2.11
RNF111Q6ZNA4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 MIR302D-201ENST00000362275 68 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 MIR30D-201ENST00000362283 70 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 SNORD114-1-201ENST00000362705 72 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 RNU6-654P-201ENST00000364373 107 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 RNY1P2-201ENST00000364820 117 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 RNU6-242P-201ENST00000384359 107 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 MIR181B2-201ENST00000385004 89 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 SNORD78.1-201ENST00000390866 65 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 MIR1185-1-201ENST00000408598 86 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 Y_RNA.620-201ENST00000411009 88 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 snoU13.15-201ENST00000459407 104 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 snoU13.26-201ENST00000459452 105 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 AC138749.4-201ENST00000563970 127 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
RNF111Q6ZNA4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 SNORA2B-201ENST00000384583 137 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 MIR30A-201ENST00000385092 71 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 AP003716.2-201ENST00000528260 108 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 AL513043.2-201ENST00000573941 143 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 MIR4500-201ENST00000579472 76 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 MIR3937-201ENST00000580135 106 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 AC025521.1-201ENST00000621624 286 ntBASIC1.82□□□□□ -2.12
RNF111Q6ZNA4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
RNF111Q6ZNA4 RNA5SP264-201ENST00000363115 107 ntBASIC1.81□□□□□ -2.12
RNF111Q6ZNA4 RNU6-1276P-201ENST00000365372 104 ntBASIC1.81□□□□□ -2.12
RNF111Q6ZNA4 MT-TN-201ENST00000387400 73 ntBASIC1.81□□□□□ -2.12
RNF111Q6ZNA4 AC245517.4-201ENST00000448601 281 ntBASIC1.81□□□□□ -2.12
RNF111Q6ZNA4 MIR7843-201ENST00000622274 79 ntBASIC1.81□□□□□ -2.12
RNF111Q6ZNA4 AL359851.1-201ENST00000569460 4997 ntBASIC1.81□□□□□ -2.12
RNF111Q6ZNA4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
RNF111Q6ZNA4 HSBP1P2-201ENST00000299671 229 ntBASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 RNU6-228P-201ENST00000362700 106 ntBASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 RNA5SP133-201ENST00000363368 119 ntBASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 RNU6-1125P-201ENST00000363601 107 ntBASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 RNU6-1124P-201ENST00000384169 107 ntBASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 RNU6-480P-201ENST00000384332 107 ntBASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 RPL23AP42-201ENST00000471152 471 ntBASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 MIR5588-201ENST00000581890 63 ntBASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RNF111Q6ZNA4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RNF111Q6ZNA4 MIR504-201ENST00000385065 83 ntBASIC1.79□□□□□ -2.12
RNF111Q6ZNA4 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
RNF111Q6ZNA4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 RNU6-979P-201ENST00000383896 107 ntBASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 RNU6-613P-201ENST00000410412 108 ntBASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 Y_RNA.611-201ENST00000410682 108 ntBASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 RPL30P7-201ENST00000479312 323 ntBASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 Y_RNA.685-201ENST00000516532 108 ntBASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 RNU11-2P-201ENST00000516898 142 ntBASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF111Q6ZNA4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.77□□□□□ -2.13
RNF111Q6ZNA4 MIR676-201ENST00000390702 67 ntBASIC1.77□□□□□ -2.13
RNF111Q6ZNA4 RNU4-83P-201ENST00000410863 133 ntBASIC1.77□□□□□ -2.13
RNF111Q6ZNA4 RNA5SP225-201ENST00000410874 135 ntBASIC1.77□□□□□ -2.13
RNF111Q6ZNA4 BX276092.1-201ENST00000427368 251 ntBASIC1.77□□□□□ -2.13
RNF111Q6ZNA4 RNU6-237P-201ENST00000515985 71 ntBASIC1.77□□□□□ -2.13
RNF111Q6ZNA4 RNU6-165P-201ENST00000517170 99 ntBASIC1.77□□□□□ -2.13
RNF111Q6ZNA4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.77□□□□□ -2.13
RNF111Q6ZNA4 MIR3664-201ENST00000579074 99 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 277.3 ms