Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 SNORD77B-201ENST00000391112 67 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 MIR18B-201ENST00000454574 71 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 RNU6-237P-201ENST00000515985 71 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 AC023827.1-201ENST00000569247 97 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 MIR6129-201ENST00000616087 109 ntBASIC0.84□□□□□ -2.27
SNAI3Q3KNW1 Y_RNA.35-201ENST00000362601 101 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 Y_RNA.281-201ENST00000364774 94 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 RNU6-392P-201ENST00000364926 101 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 RNU6-215P-201ENST00000365169 102 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 RNU6-616P-201ENST00000384353 107 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 RNU6-880P-201ENST00000384526 107 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 MT-TF-201ENST00000387314 71 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 AL603825.1-201ENST00000438481 80 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 snoU13.21-201ENST00000459368 105 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 RNU6-589P-201ENST00000516485 107 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 AL035470.1-201ENST00000622571 220 ntBASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SNAI3Q3KNW1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1325P-201ENST00000364905 105 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 SNORD20-201ENST00000384550 80 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 U8.15-201ENST00000390947 134 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 RPL39P34-201ENST00000477141 156 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 PDCD5P2-201ENST00000507570 312 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 SNORD67.1-201ENST00000516618 108 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 RNU7-137P-201ENST00000516788 62 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 MIR4498-201ENST00000577599 66 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 SNORA4-201ENST00000584302 138 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 MIR1255B1-201ENST00000636325 63 ntBASIC0.82□□□□□ -2.28
SNAI3Q3KNW1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 SNORD114-10-201ENST00000363409 72 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 SNORD115-35-201ENST00000365122 82 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 RNU6-934P-201ENST00000365154 107 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 MIR206-201ENST00000384872 86 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 MIR942-201ENST00000401111 86 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 AC096949.1-201ENST00000412047 152 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 Y_RNA.709-201ENST00000516952 92 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 RNU6-94P-201ENST00000607728 107 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 AL162726.3-218ENST00000636401 95 ntBASIC0.81□□□□□ -2.28
SNAI3Q3KNW1 RNU6-363P-201ENST00000362895 105 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 SNORA63.5-201ENST00000363548 123 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 SNORD83.1-201ENST00000411362 77 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 RPS26P5-201ENST00000418544 335 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 TRMT112P2-201ENST00000512910 132 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 AC108729.3-201ENST00000513484 108 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 RNU7-2P-201ENST00000516096 62 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 MIR4781-201ENST00000585250 76 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 AL589743.1-201ENST00000551932 2712 ntBASIC0.8□□□□□ -2.28
SNAI3Q3KNW1 RNU6-369P-201ENST00000362515 102 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 SNORD114-27-201ENST00000363766 70 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU4-67P-201ENST00000364569 141 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 Y_RNA.309-201ENST00000365046 111 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-816P-201ENST00000390914 107 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1307P-201ENST00000391012 103 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNY4P18-201ENST00000391107 89 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1268P-201ENST00000391214 107 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1239P-201ENST00000391310 107 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-321P-201ENST00000410912 106 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU7-185P-201ENST00000459215 60 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-412P-201ENST00000516434 106 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-521P-201ENST00000516663 105 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-919P-201ENST00000516731 104 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 AC068339.1-201ENST00000526965 141 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 AC020891.4-201ENST00000605745 93 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.79□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1107P-201ENST00000364817 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 U8.6-201ENST00000364939 135 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 Y_RNA.323-201ENST00000365157 109 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-447P-201ENST00000410293 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 MIR1912-201ENST00000410389 80 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-355P-201ENST00000410427 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-791P-201ENST00000410467 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-705P-201ENST00000410601 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-860P-201ENST00000410860 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 RNU6-785P-201ENST00000411324 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 AL353813.1-201ENST00000440700 253 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 MIR5009-201ENST00000578736 100 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 U6.90-201ENST00000614007 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 AC105081.1-201ENST00000617727 106 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 U6.70-201ENST00000620287 104 ntBASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SNAI3Q3KNW1 Y_RNA.49-201ENST00000362714 112 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms