Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RNU6-1076P-201ENST00000410397 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-355P-201ENST00000410427 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-791P-201ENST00000410467 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-994P-201ENST00000410507 111 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-705P-201ENST00000410601 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-735P-201ENST00000410612 107 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-1100P-201ENST00000410691 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-860P-201ENST00000410860 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-1217P-201ENST00000411276 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-785P-201ENST00000411324 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 U6.90-201ENST00000614007 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 U6.70-201ENST00000620287 104 ntBASIC1.13□□□□□ -2.23
PTCHD3Q3KNS1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 SNORD114-27-201ENST00000363766 70 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-1144P-201ENST00000384247 104 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 RPL39P34-201ENST00000477141 156 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 AC007012.1-201ENST00000567192 175 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-94P-201ENST00000607728 107 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 MIR6504-201ENST00000613520 61 ntBASIC1.12□□□□□ -2.23
PTCHD3Q3KNS1 SNORD114-24-201ENST00000365029 72 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-1056P-201ENST00000383996 107 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 U8.15-201ENST00000390947 134 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-1064P-201ENST00000410626 104 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 Y_RNA.629-201ENST00000411368 105 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 RPL39P25-201ENST00000449384 154 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 U7.7-201ENST00000459276 60 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 snoU13.21-201ENST00000459368 105 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 SNORD67.1-201ENST00000516618 108 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 RNU7-137P-201ENST00000516788 62 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 AL136317.1-201ENST00000612653 226 ntBASIC1.11□□□□□ -2.23
PTCHD3Q3KNS1 MIR1-1-201ENST00000362147 71 ntBASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-476P-201ENST00000384726 107 ntBASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 MIR1827-201ENST00000408549 66 ntBASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 SNORD83.1-201ENST00000411362 77 ntBASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 RNU7-185P-201ENST00000459215 60 ntBASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.1□□□□□ -2.23
PTCHD3Q3KNS1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 SNORD115-35-201ENST00000365122 82 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 RNU1-36P-201ENST00000365130 165 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 Y_RNA.362-201ENST00000365518 110 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 RNU6-616P-201ENST00000384353 107 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 RNU7-2P-201ENST00000516096 62 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 MIR4771-2-201ENST00000577758 74 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 MIR4771-1-201ENST00000582617 74 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.09□□□□□ -2.23
PTCHD3Q3KNS1 AC023934.1-201ENST00000574529 2389 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-369P-201ENST00000362515 102 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.344-201ENST00000365381 112 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 SNORD114-22-201ENST00000365423 72 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 SNORD116-21-201ENST00000384507 92 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 MIR206-201ENST00000384872 86 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 MIR548A1-201ENST00000385041 97 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 MIR125B2-201ENST00000385128 89 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 MIR1257-201ENST00000408490 117 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.773-201ENST00000607168 90 ntBASIC1.08□□□□□ -2.24
PTCHD3Q3KNS1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-363P-201ENST00000362895 105 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.85-201ENST00000363014 111 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.281-201ENST00000364774 94 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-880P-201ENST00000384526 107 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 SNORD93-201ENST00000408813 74 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 MIR1912-201ENST00000410389 80 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 AC096949.1-201ENST00000412047 152 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-412P-201ENST00000516434 106 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 MTND5P34-201ENST00000568888 325 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 MIR4676-201ENST00000583078 72 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 AC020891.4-201ENST00000605745 93 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 AL589743.1-201ENST00000551932 2712 ntBASIC1.07□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.309-201ENST00000365046 111 ntBASIC1.06□□□□□ -2.24
PTCHD3Q3KNS1 MIR518E-201ENST00000385252 88 ntBASIC1.06□□□□□ -2.24
PTCHD3Q3KNS1 MIR100-201ENST00000385259 80 ntBASIC1.06□□□□□ -2.24
PTCHD3Q3KNS1 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
PTCHD3Q3KNS1 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
PTCHD3Q3KNS1 AC133485.1-201ENST00000567176 124 ntBASIC1.06□□□□□ -2.24
PTCHD3Q3KNS1 AL162726.3-218ENST00000636401 95 ntBASIC1.06□□□□□ -2.24
PTCHD3Q3KNS1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.98-201ENST00000363109 102 ntBASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 RNY1P2-201ENST00000364820 117 ntBASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 Y_RNA.507-201ENST00000384500 99 ntBASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.05□□□□□ -2.24
PTCHD3Q3KNS1 RNU6-977P-201ENST00000516411 103 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms