Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 Y_RNA.588-201ENST00000391254 102 ntBASIC0.53□□□□□ -2.32
CDK3Q00526 AC096949.1-201ENST00000412047 152 ntBASIC0.53□□□□□ -2.32
CDK3Q00526 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
CDK3Q00526 AC112693.2-201ENST00000556538 232 ntBASIC0.53□□□□□ -2.32
CDK3Q00526 MIR6082-201ENST00000613604 109 ntBASIC0.53□□□□□ -2.32
CDK3Q00526 SNORD115-2-201ENST00000362842 82 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 SNORD115-20-201ENST00000365099 82 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 RNU4-11P-201ENST00000365287 132 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 Y_RNA.617-201ENST00000410920 90 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
CDK3Q00526 RNU2-35P-201ENST00000516446 142 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 Y_RNA.686-201ENST00000516548 134 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 Y_RNA.690-201ENST00000516603 95 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 RNU6-182P-201ENST00000516970 105 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 RNU7-35P-201ENST00000517174 62 ntBASIC0.52□□□□□ -2.33
CDK3Q00526 Y_RNA.531-201ENST00000384589 121 ntBASIC0.51□□□□□ -2.33
CDK3Q00526 MIR613-201ENST00000385248 95 ntBASIC0.51□□□□□ -2.33
CDK3Q00526 MIR936-201ENST00000401264 98 ntBASIC0.51□□□□□ -2.33
CDK3Q00526 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
CDK3Q00526 RNU7-164P-201ENST00000459221 62 ntBASIC0.51□□□□□ -2.33
CDK3Q00526 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
CDK3Q00526 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.5□□□□□ -2.33
CDK3Q00526 RNU6-151P-201ENST00000364158 107 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 Y_RNA.251-201ENST00000364551 99 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 RNU6-309P-201ENST00000364573 106 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 AL603914.1-201ENST00000401964 204 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 Y_RNA.651-201ENST00000459380 103 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 RNU5E-3P-201ENST00000515913 68 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 AP003327.1-201ENST00000529684 127 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.5□□□□□ -2.33
CDK3Q00526 MIR548AE2-201ENST00000583456 67 ntBASIC0.5□□□□□ -2.33
CDK3Q00526 RNU6-449P-201ENST00000383914 107 ntBASIC0.49□□□□□ -2.33
CDK3Q00526 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
CDK3Q00526 SNORA25.16-201ENST00000516741 121 ntBASIC0.49□□□□□ -2.33
CDK3Q00526 RNU6-765P-201ENST00000516916 99 ntBASIC0.49□□□□□ -2.33
CDK3Q00526 MIR4711-201ENST00000578274 70 ntBASIC0.49□□□□□ -2.33
CDK3Q00526 AC090425.1-201ENST00000610007 140 ntBASIC0.49□□□□□ -2.33
CDK3Q00526 AC092634.7-201ENST00000621022 103 ntBASIC0.49□□□□□ -2.33
CDK3Q00526 RNU7-123P-201ENST00000515911 60 ntBASIC0.48□□□□□ -2.33
CDK3Q00526 RN7SKP12-201ENST00000516275 143 ntBASIC0.48□□□□□ -2.33
CDK3Q00526 MIR3678-201ENST00000578455 94 ntBASIC0.48□□□□□ -2.33
CDK3Q00526 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
CDK3Q00526 Y_RNA.778-201ENST00000620203 90 ntBASIC0.48□□□□□ -2.33
CDK3Q00526 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
CDK3Q00526 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.48□□□□□ -2.33
CDK3Q00526 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CDK3Q00526 RNU6-1130P-201ENST00000365434 107 ntBASIC0.47□□□□□ -2.33
CDK3Q00526 Y_RNA.366-201ENST00000365540 102 ntBASIC0.47□□□□□ -2.33
CDK3Q00526 SNORD116-18-201ENST00000383961 92 ntBASIC0.47□□□□□ -2.33
CDK3Q00526 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
CDK3Q00526 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
CDK3Q00526 RNU6-469P-201ENST00000516253 101 ntBASIC0.47□□□□□ -2.33
CDK3Q00526 RNA5SP94-201ENST00000516917 108 ntBASIC0.47□□□□□ -2.33
CDK3Q00526 DEFB131E-201ENST00000532329 154 ntBASIC0.47□□□□□ -2.33
CDK3Q00526 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
CDK3Q00526 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CDK3Q00526 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
CDK3Q00526 Y_RNA.580-201ENST00000391004 95 ntBASIC0.46□□□□□ -2.34
CDK3Q00526 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
CDK3Q00526 MIR1270-201ENST00000459320 83 ntBASIC0.46□□□□□ -2.34
CDK3Q00526 Y_RNA.697-201ENST00000516776 113 ntBASIC0.46□□□□□ -2.34
CDK3Q00526 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.46□□□□□ -2.34
CDK3Q00526 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
CDK3Q00526 Y_RNA.8-201ENST00000362353 102 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 RNA5SP133-201ENST00000363368 119 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 Y_RNA.270-201ENST00000364693 104 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 Y_RNA.298-201ENST00000364960 107 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 MIR644A-201ENST00000385262 94 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 RNU6-460P-201ENST00000391158 108 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 RNU6-394P-201ENST00000410735 107 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 SNORA25.12-201ENST00000516202 82 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 SNORD67.1-201ENST00000516618 108 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 RNU7-137P-201ENST00000516788 62 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 MTND5P34-201ENST00000568888 325 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 uc_338.16-201ENST00000621804 95 ntBASIC0.45□□□□□ -2.34
CDK3Q00526 Y_RNA.150-201ENST00000363562 102 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 RNA5SP517-201ENST00000364724 117 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 Y_RNA.299-201ENST00000364973 94 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 RNU6-804P-201ENST00000384286 107 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 Y_RNA.536-201ENST00000384621 113 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 Y_RNA.540-201ENST00000384638 111 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 MIR216A-201ENST00000385063 110 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 MIR513C-201ENST00000401352 84 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 RNU7-197P-201ENST00000458836 62 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 AL359881.1-201ENST00000602916 267 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 AL137067.1-201ENST00000615933 120 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 FTX_2.1-201ENST00000618816 94 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 U6.109-201ENST00000636749 87 ntBASIC0.44□□□□□ -2.34
CDK3Q00526 Y_RNA.32-201ENST00000362589 110 ntBASIC0.43□□□□□ -2.34
CDK3Q00526 RNU4-58P-201ENST00000363192 141 ntBASIC0.43□□□□□ -2.34
CDK3Q00526 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
CDK3Q00526 Y_RNA.174-201ENST00000363781 105 ntBASIC0.43□□□□□ -2.34
CDK3Q00526 RNU6-291P-201ENST00000384720 107 ntBASIC0.43□□□□□ -2.34
CDK3Q00526 RNU6-535P-201ENST00000384722 107 ntBASIC0.43□□□□□ -2.34
CDK3Q00526 Y_RNA.567-201ENST00000384736 106 ntBASIC0.43□□□□□ -2.34
CDK3Q00526 RNU4-69P-201ENST00000410677 143 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms