Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 RNU7-137P-201ENST00000516788 62 ntBASIC0.64□□□□□ -2.31
PAX9P55771 RNA5SP102-201ENST00000516865 106 ntBASIC0.64□□□□□ -2.31
PAX9P55771 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
PAX9P55771 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.64□□□□□ -2.31
PAX9P55771 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
PAX9P55771 Y_RNA.13-201ENST00000362403 112 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-235P-201ENST00000362644 107 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-403P-201ENST00000363163 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 SNORA40-201ENST00000388090 126 ntBASIC0.63□□□□□ -2.31
PAX9P55771 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
PAX9P55771 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-447P-201ENST00000410293 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-1118P-201ENST00000410382 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-1076P-201ENST00000410397 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-355P-201ENST00000410427 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-791P-201ENST00000410467 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-705P-201ENST00000410601 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-1100P-201ENST00000410691 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-860P-201ENST00000410860 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-1217P-201ENST00000411276 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 RNU6-785P-201ENST00000411324 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
PAX9P55771 Y_RNA.703-201ENST00000516846 111 ntBASIC0.63□□□□□ -2.31
PAX9P55771 AC090897.1-201ENST00000580909 226 ntBASIC0.63□□□□□ -2.31
PAX9P55771 U6.90-201ENST00000614007 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 U6.70-201ENST00000620287 104 ntBASIC0.63□□□□□ -2.31
PAX9P55771 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
PAX9P55771 Y_RNA.299-201ENST00000364973 94 ntBASIC0.62□□□□□ -2.31
PAX9P55771 RNU6-187P-201ENST00000384139 106 ntBASIC0.62□□□□□ -2.31
PAX9P55771 Y_RNA.586-201ENST00000391146 98 ntBASIC0.62□□□□□ -2.31
PAX9P55771 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.62□□□□□ -2.31
PAX9P55771 SNORA25.16-201ENST00000516741 121 ntBASIC0.62□□□□□ -2.31
PAX9P55771 TUG1_4.1-201ENST00000619464 181 ntBASIC0.62□□□□□ -2.31
PAX9P55771 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.62□□□□□ -2.31
PAX9P55771 Y_RNA.4-201ENST00000362333 112 ntBASIC0.61□□□□□ -2.31
PAX9P55771 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
PAX9P55771 RNU6-746P-201ENST00000384112 109 ntBASIC0.61□□□□□ -2.31
PAX9P55771 MIR1263-201ENST00000408324 86 ntBASIC0.61□□□□□ -2.31
PAX9P55771 MIR3612-201ENST00000579753 87 ntBASIC0.61□□□□□ -2.31
PAX9P55771 MIR6082-201ENST00000613604 109 ntBASIC0.61□□□□□ -2.31
PAX9P55771 AC105081.1-201ENST00000617727 106 ntBASIC0.61□□□□□ -2.31
PAX9P55771 MIR96-201ENST00000362288 78 ntBASIC0.6□□□□□ -2.31
PAX9P55771 SNORD114-10-201ENST00000363409 72 ntBASIC0.6□□□□□ -2.31
PAX9P55771 MIRLET7F2-201ENST00000385277 83 ntBASIC0.6□□□□□ -2.31
PAX9P55771 RNU6-1307P-201ENST00000391012 103 ntBASIC0.6□□□□□ -2.31
PAX9P55771 SNORD100-201ENST00000408573 76 ntBASIC0.6□□□□□ -2.31
PAX9P55771 RNU6-735P-201ENST00000410612 107 ntBASIC0.6□□□□□ -2.31
PAX9P55771 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.6□□□□□ -2.31
PAX9P55771 AC002350.1-201ENST00000490759 375 ntBASIC0.6□□□□□ -2.31
PAX9P55771 RNU6-971P-201ENST00000516920 106 ntBASIC0.6□□□□□ -2.31
PAX9P55771 MIR3973-201ENST00000579824 107 ntBASIC0.6□□□□□ -2.31
PAX9P55771 AC087741.2-201ENST00000619415 172 ntBASIC0.6□□□□□ -2.31
PAX9P55771 SNORA72.6-201ENST00000384520 129 ntBASIC0.59□□□□□ -2.31
PAX9P55771 RNA5SP222-201ENST00000411039 105 ntBASIC0.59□□□□□ -2.31
PAX9P55771 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
PAX9P55771 RNU6-448P-201ENST00000517052 107 ntBASIC0.59□□□□□ -2.31
PAX9P55771 AC138749.4-201ENST00000563970 127 ntBASIC0.59□□□□□ -2.31
PAX9P55771 U6.109-201ENST00000636749 87 ntBASIC0.59□□□□□ -2.31
PAX9P55771 MIR6866-201ENST00000638146 69 ntBASIC0.59□□□□□ -2.31
PAX9P55771 MIR18A-201ENST00000362310 71 ntBASIC0.58□□□□□ -2.32
PAX9P55771 RNA5SP133-201ENST00000363368 119 ntBASIC0.58□□□□□ -2.32
PAX9P55771 Y_RNA.198-201ENST00000364013 98 ntBASIC0.58□□□□□ -2.32
PAX9P55771 SNORD58C-201ENST00000365223 64 ntBASIC0.58□□□□□ -2.32
PAX9P55771 SNORD50.2-201ENST00000365465 70 ntBASIC0.58□□□□□ -2.32
PAX9P55771 RNU6-616P-201ENST00000384353 107 ntBASIC0.58□□□□□ -2.32
PAX9P55771 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
PAX9P55771 MIR206-201ENST00000384872 86 ntBASIC0.58□□□□□ -2.32
PAX9P55771 RNU6-1321P-201ENST00000390905 107 ntBASIC0.58□□□□□ -2.32
PAX9P55771 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.58□□□□□ -2.32
PAX9P55771 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
PAX9P55771 RNU6-1211P-201ENST00000459179 105 ntBASIC0.58□□□□□ -2.32
PAX9P55771 MIR8070-201ENST00000616510 88 ntBASIC0.58□□□□□ -2.32
PAX9P55771 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.58□□□□□ -2.32
PAX9P55771 MIR6767-201ENST00000637302 66 ntBASIC0.58□□□□□ -2.32
PAX9P55771 MIR373-201ENST00000362273 69 ntBASIC0.57□□□□□ -2.32
PAX9P55771 SNORA25.9-201ENST00000365087 128 ntBASIC0.57□□□□□ -2.32
PAX9P55771 Y_RNA.525-201ENST00000384570 113 ntBASIC0.57□□□□□ -2.32
PAX9P55771 MIR613-201ENST00000385248 95 ntBASIC0.57□□□□□ -2.32
PAX9P55771 SNORD77B-201ENST00000391112 67 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNA5SP136-201ENST00000410906 107 ntBASIC0.57□□□□□ -2.32
PAX9P55771 Y_RNA.630-201ENST00000411370 108 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNU7-107P-201ENST00000459121 61 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNU6-772P-201ENST00000516042 105 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNU6-1061P-201ENST00000516530 99 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNU6-531P-201ENST00000516694 104 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNU7-6P-201ENST00000516845 62 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNU6-1234P-201ENST00000516877 103 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNU6-765P-201ENST00000516916 99 ntBASIC0.57□□□□□ -2.32
PAX9P55771 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
PAX9P55771 MTND5P34-201ENST00000568888 325 ntBASIC0.57□□□□□ -2.32
PAX9P55771 RNU6-704P-201ENST00000364162 103 ntBASIC0.56□□□□□ -2.32
PAX9P55771 Y_RNA.218-201ENST00000364218 104 ntBASIC0.56□□□□□ -2.32
PAX9P55771 Y_RNA.528-201ENST00000384575 108 ntBASIC0.56□□□□□ -2.32
PAX9P55771 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.56□□□□□ -2.32
PAX9P55771 MIR3163-201ENST00000581592 73 ntBASIC0.56□□□□□ -2.32
PAX9P55771 Y_RNA.773-201ENST00000607168 90 ntBASIC0.56□□□□□ -2.32
PAX9P55771 SNORD115-19-201ENST00000363098 82 ntBASIC0.55□□□□□ -2.32
PAX9P55771 SNORD115-18-201ENST00000363293 82 ntBASIC0.55□□□□□ -2.32
PAX9P55771 Y_RNA.191-201ENST00000363972 113 ntBASIC0.55□□□□□ -2.32
PAX9P55771 SNORD115-17-201ENST00000364612 82 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms