Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MIR5688-201ENST00000580619 83 ntBASIC-1.7□□□□□ -2.68
GTF2A1P52655 AC119751.7-201ENST00000600494 245 ntBASIC-1.7□□□□□ -2.68
GTF2A1P52655 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 RNU4-10P-201ENST00000364383 140 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 HLA-S-202ENST00000425174 53 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 MIR1270-201ENST00000459320 83 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 AC026421.1-201ENST00000519101 163 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.71□□□□□ -2.68
GTF2A1P52655 AL365205.2-201ENST00000594586 68 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 MIR4320-201ENST00000636981 65 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 AC132825.6-201ENST00000638861 357 ntBASIC-1.71□□□□□ -2.68
GTF2A1P52655 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 MIR582-201ENST00000365731 98 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 RNU6-592P-201ENST00000411333 103 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 PMCHL1-202ENST00000423102 261 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.72□□□□□ -2.68
GTF2A1P52655 SNRPGP8-201ENST00000454064 226 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 SNORD18.2-201ENST00000459604 70 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 AC097510.1-201ENST00000510945 133 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.72□□□□□ -2.68
GTF2A1P52655 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 AC096644.2-201ENST00000429278 159 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 MTND1P1-201ENST00000445453 368 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 AC107399.1-201ENST00000451226 265 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 HAR1A.1-201ENST00000459583 118 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 RNU6-570P-201ENST00000517051 105 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 SNORD113-5-201ENST00000607261 78 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 AP001362.1-201ENST00000625165 124 ntBASIC-1.73□□□□□ -2.69
GTF2A1P52655 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 RNY1P6-201ENST00000384193 109 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
GTF2A1P52655 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 SEPT14P8-201ENST00000508026 178 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 RNU6-507P-201ENST00000516045 100 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 RNU6-479P-201ENST00000516348 105 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 AL442663.2-201ENST00000554385 511 ntBASIC-1.74□□□□□ -2.69
GTF2A1P52655 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 MIR206-201ENST00000384872 86 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 MIR548E-201ENST00000408287 88 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 AC006362.1-201ENST00000567392 174 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 VN1R91P-201ENST00000594377 169 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 AC006006.1-201ENST00000603082 144 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 AC093424.1-201ENST00000604999 338 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 AC015540.1-201ENST00000615828 501 ntBASIC-1.75□□□□□ -2.69
GTF2A1P52655 SNORD114-17-201ENST00000364699 75 ntBASIC-1.76□□□□□ -2.69
GTF2A1P52655 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.76□□□□□ -2.69
GTF2A1P52655 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.76□□□□□ -2.69
GTF2A1P52655 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.76□□□□□ -2.69
GTF2A1P52655 RNU6-588P-201ENST00000410281 105 ntBASIC-1.76□□□□□ -2.69
GTF2A1P52655 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.76□□□□□ -2.69
GTF2A1P52655 RNU6-358P-201ENST00000516564 75 ntBASIC-1.76□□□□□ -2.69
GTF2A1P52655 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.77□□□□□ -2.69
GTF2A1P52655 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.77□□□□□ -2.69
GTF2A1P52655 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.77□□□□□ -2.69
GTF2A1P52655 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 MIR516A2-201ENST00000384888 90 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 MIR516A1-201ENST00000385033 90 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 RNA5SP266-201ENST00000410273 108 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 AC082651.2-201ENST00000496833 166 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 AC109635.3-201ENST00000529536 185 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 snoR1.1-201ENST00000628177 80 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 U6.100-201ENST00000636230 99 ntBASIC-1.78□□□□□ -2.69
GTF2A1P52655 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 MIR8485-201ENST00000401372 91 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 RNU6-850P-201ENST00000516934 103 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 MIR5591-201ENST00000578248 65 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 MIR548O2-201ENST00000616090 70 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 TRDV1-202ENST00000621643 102 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 AC090582.1-201ENST00000636321 199 ntBASIC-1.79□□□□□ -2.7
GTF2A1P52655 SNORD115-23-201ENST00000364461 82 ntBASIC-1.8□□□□□ -2.7
GTF2A1P52655 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.8□□□□□ -2.7
GTF2A1P52655 MT-TT-201ENST00000387460 66 ntBASIC-1.8□□□□□ -2.7
GTF2A1P52655 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.8□□□□□ -2.7
GTF2A1P52655 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms