Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.77□□□□□ -2.53
COL4A5P29400 MIR599-201ENST00000385069 95 ntBASIC-0.77□□□□□ -2.53
COL4A5P29400 SNORD38.3-201ENST00000516599 73 ntBASIC-0.77□□□□□ -2.53
COL4A5P29400 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.77□□□□□ -2.53
COL4A5P29400 uc_338.19-201ENST00000616808 99 ntBASIC-0.77□□□□□ -2.53
COL4A5P29400 MIR3688-2-201ENST00000636963 87 ntBASIC-0.77□□□□□ -2.53
COL4A5P29400 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 RNY4P27-201ENST00000363341 96 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 MT-TT-201ENST00000387460 66 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 MIR1277-201ENST00000408536 78 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 AL731563.1-201ENST00000442202 214 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 MTND5P18-201ENST00000445624 1801 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 SCARNA18B-201ENST00000458806 135 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 RNU6-274P-201ENST00000459566 107 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 AC010655.3-201ENST00000478818 450 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 AC021146.9-201ENST00000512503 156 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 RNU6-358P-201ENST00000516564 75 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 AL606534.2-204ENST00000635008 178 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 RNU6-728P-201ENST00000365375 104 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 RNU6-455P-201ENST00000384681 107 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 MIR518B-201ENST00000385127 83 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 SNORD64-201ENST00000386683 67 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 RNA5SP484-201ENST00000458857 111 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 SNORA20.3-201ENST00000516880 132 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 SNORD116.3-201ENST00000517176 78 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 MIR3920-201ENST00000581751 86 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 RNU6-86P-201ENST00000606534 107 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 AC037487.3-201ENST00000606668 112 ntBASIC-0.78□□□□□ -2.53
COL4A5P29400 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
COL4A5P29400 MIR548I2-201ENST00000408348 149 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 SNORD2-201ENST00000459163 69 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 RNU6-559P-201ENST00000516151 98 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 RNU7-13P-201ENST00000516413 62 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 YWHAEP2-201ENST00000580066 112 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 snoU18.1-201ENST00000629629 71 ntBASIC-0.79□□□□□ -2.54
COL4A5P29400 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 RNU4-10P-201ENST00000364383 140 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 SNORD115-44-201ENST00000365391 82 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 MIR617-201ENST00000385030 97 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 AC140658.3-201ENST00000567603 271 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 MIR3179-1-201ENST00000578940 84 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 MIR3179-2-201ENST00000579107 84 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 MIR3179-3-201ENST00000579566 84 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 MIR3179-4-201ENST00000617599 84 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 MIR4272-201ENST00000635924 64 ntBASIC-0.8□□□□□ -2.54
COL4A5P29400 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 SNORA13-201ENST00000458790 133 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 RNA5SP180-201ENST00000516181 101 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 AC097639.2-201ENST00000603159 172 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 MIR376A1-201ENST00000616574 68 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 MIR6841-201ENST00000637129 72 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 SNORD115-20-201ENST00000365099 82 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 SNORD56B-201ENST00000384713 71 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 SNORD67.1-201ENST00000516618 108 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 MIR5197-201ENST00000583721 112 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 AC098479.1-201ENST00000609225 154 ntBASIC-0.81□□□□□ -2.54
COL4A5P29400 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 RNU6-900P-201ENST00000384498 102 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 MIR9-2-201ENST00000384838 87 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 MIR559-201ENST00000385188 96 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 AL606845.1-201ENST00000404881 255 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 AC097635.1-201ENST00000450678 155 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 HSPE1P25-201ENST00000455484 251 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 RNU6-175P-201ENST00000516896 107 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.82□□□□□ -2.54
COL4A5P29400 MIR6851-201ENST00000617060 67 ntBASIC-0.82□□□□□ -2.54
COL4A5P29400 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.83□□□□□ -2.54
COL4A5P29400 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.83□□□□□ -2.54
COL4A5P29400 RNU6-431P-201ENST00000383874 107 ntBASIC-0.83□□□□□ -2.54
COL4A5P29400 RNY1P6-201ENST00000384193 109 ntBASIC-0.83□□□□□ -2.54
COL4A5P29400 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.83□□□□□ -2.54
COL4A5P29400 AP000533.3-201ENST00000447704 118 ntBASIC-0.83□□□□□ -2.54
COL4A5P29400 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.83□□□□□ -2.54
COL4A5P29400 MIR4473-201ENST00000583731 91 ntBASIC-0.83□□□□□ -2.54
COL4A5P29400 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms